Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0834 ATGGAGGAGATGTCTTCTGCGATTGCAGTGCCATTGAGAGTAGGTAATTCAGTTTGTGATAACCCGACCTTAGCTACCCATATGGATGTATCCAGACTTAAGCTGATGGCAGATGCTGGATTGTTATCTAATTCAATTTCTAAGGTTTCAACTGAGACAGTTGTAGCTTCTGATGAGGATCATAATGGTGGGAATCTGGGGAACCAAGTTAGCATTACTGCGGTTTCATCACCAAAACTTGATGGGGAAGAAGAAATTCCCTTGTCGGATACAATATCCCAAAATAAAAGCACATCAGTGGCTGGTGCTGAAGTTTTAACCCCAGAAATTGAGGATGATGATACAATATCATTGGAGGGTGATCAGATCATTGATAGCTCTTGTTCTCTTTCGGTGGTCAGTGAGAATAGCAGCATATGTGGAGAGGAGTTTGTCAATTTCGAGGCTACTTCTGAGATAAAGGCACCGACTGCCATTGACATGGAGAAGAGCATCTGTGCACAGCCTGCTGATTTAGCGGAGCCTAATGTTGAACCAGAAAGTGTTGGTGAACCCCTTGCTGTGGCAGTGAGCCTTGAAGAGGCTAGAGTTGGATCTGGCCCACATCATTCCGCGGTTGTTCTTGAGCTGCCTCTAGAAAAAGTGGTGAGTGGAACAGTTGGTCGTAGTGTCTTCGAATTAGATTATGCCCCACTTTGGGGATTCCTTTCTATGTGTGGAAGAAGGCCTGAGATGGAAGATGCAGTTGCCACTGTGCCTCGATTTATGAAAATTCCTATTCAAATGCTAATCGGTGACAGGGTAATTGATGGAATGAGCAAGTGCTTGAGCCAGCAGACAGTTCATTTCTTTGGAGTTTATGATGGCCATGGTGGCTCTCAGGTGGCAAATTATTGTCGTGATCGTGTCCATTTGGCTTTGGCTGAGGAAATAGAATTTGCGCAAGAAGGTCTAATAAATGGAAGTATCAAGGATAGCATTCAAGATCAGTGGAAAAAAGCCTTCACCAATTGTTTTTTAAAGGTTGATGCCGAAGTTGGAGGAAAAGCTAACTGTGAACCTGTTGCCCCAGAAACCGTTGGTTCCACTGCTGTTGTTGCTGTTATTTGTGCATCTCATATCATTGTTGCTAACTGTGGTGATTCAAGAGCAGTTCTGTGCCGTGGCAAAGAACCCATGGCATTATCAGTGGATCATAAACCTAACCGAGATGATGAATATGCAAGAATTGAAGCCGCTGGAGGCAAGGTGATACAATGGAATGGTCATCGTGTGTTTGGTGTTCTTGCAATGTCAAGGTCTATAGGTGATAGATATTTGAAGCCATGGATTATTCCAGAACCAGAGGTTATGTTTCTTCCTCGCGCAAAAGACGATGAATGCCTCATTCTGGCCAGTGATGGTCTGTGGGATGTCATGACGAATGAAGAGGCGTGTGACCTAGCTCGAAGACGAATACTTATGTGGCACAAGAAAAACGGAATCTCACCAGCCTTAGAGAAGGGAGAGGGTTCCGCTGACCCTGCTGCACAAGCAGCGGCGGAATATTTATCAAACCGTGCCCTTCAGAAAGGAAGCAAAGACAACATCACTGTAATTGTGGTGGATTTAAAAGCTCAAAGAAAATTTAAGAGCAAGACATGA 1644 0.4428 MEEMSSAIAVPLRVGNSVCDNPTLATHMDVSRLKLMADAGLLSNSISKVSTETVVASDEDHNGGNLGNQVSITAVSSPKLDGEEEIPLSDTISQNKSTSVAGAEVLTPEIEDDDTISLEGDQIIDSSCSLSVVSENSSICGEEFVNFEATSEIKAPTAIDMEKSICAQPADLAEPNVEPESVGEPLAVAVSLEEARVGSGPHHSAVVLELPLEKVVSGTVGRSVFELDYAPLWGFLSMCGRRPEMEDAVATVPRFMKIPIQMLIGDRVIDGMSKCLSQQTVHFFGVYDGHGGSQVANYCRDRVHLALAEEIEFAQEGLINGSIKDSIQDQWKKAFTNCFLKVDAEVGGKANCEPVAPETVGSTAVVAVICASHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAKDDECLILASDGLWDVMTNEEACDLARRRILMWHKKNGISPALEKGEGSADPAAQAAAEYLSNRALQKGSKDNITVIVVDLKAQRKFKSKT 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0834 547 ProSiteProfiles PPM-type phosphatase domain profile. 232 537 IPR001932 -
Mibi05g0834 547 ProSitePatterns PPM-type phosphatase domain signature. 283 291 IPR000222 GO:0043169
Mibi05g0834 547 PANTHER PROTEIN PHOSPHATASE 174 537 - -
Mibi05g0834 547 SMART PP2C_4 224 535 IPR001932 -
Mibi05g0834 547 FunFam Protein phosphatase 2C 16 220 547 - -
Mibi05g0834 547 Pfam Protein phosphatase 2C 261 530 IPR001932 -
Mibi05g0834 547 CDD PP2Cc 237 537 IPR001932 -
Mibi05g0834 547 Gene3D - 219 547 IPR036457 -
Mibi05g0834 547 SUPERFAMILY PP2C-like 228 538 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0834 Mibi-ChrMibi05 7831860 7835483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0834 1 547 PP2C-type Phosphatase Gene Family AT1G17550 48.750 4.44e-169 487