Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0821 ATGTGTGTGCGCGTGAGTGTCTATATATACACAATCACACATAAAACTGAGATAGAAGATGTACGTAAACTGAATATTGGAGCATCATCAGAAGAGACGCCAGTGGACATGCGGAGCAGTCAGGGACGGAAGAAGGAACCTTGCAGAGAAGCCTGGACACCCGATGAAGACAAGAAATTGGTTCAAGTCATTCACTTACATGGCCCTAAGAGATGGAAGTTTATAGCAGCCAAAGCAGGTCTAAATCGATGTGGCAAGAGTTGCAGACTAAGATGGTTAAATTACCTTAGACCCAATATCAAGAGAGGCAATATATCAGAACAAGAGGAGGATTTAATACTCAGGCTTCACAAACTCCTAGGCAACAGGTGGTCTTTGATAGCTGGAAGACTACCGGGTCGAACTGATAATGAGATTAAGAATTACTGGAACTCTCATTTGAGCAAGAAGATCATGAGTCAGAGGAAACAAAACAGAGGTTTCAAAAAAGATTCCACGGTGGAGAAAGCTACAGTAATTAGCAGTGACGAAGAACAGAGGCCTAAGGTGGTGGGGAGCTCCAAGCCTGTCTTTGTTGAATACCATGATGAAGGACCTTTAAATTTGGAATGGGTGAGCAAATTTCTTGAAATGGACGAAAATTGGTTTGGATTTGCAGATTCATGA 666 0.4234 MCVRVSVYIYTITHKTEIEDVRKLNIGASSEETPVDMRSSQGRKKEPCREAWTPDEDKKLVQVIHLHGPKRWKFIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISEQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIMSQRKQNRGFKKDSTVEKATVISSDEEQRPKVVGSSKPVFVEYHDEGPLNLEWVSKFLEMDENWFGFADS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0821 221 SMART sant 48 98 IPR001005 -
Mibi05g0821 221 SMART sant 101 149 IPR001005 -
Mibi05g0821 221 SUPERFAMILY Homeodomain-like 49 143 IPR009057 -
Mibi05g0821 221 Pfam Myb-like DNA-binding domain 49 96 IPR001005 -
Mibi05g0821 221 Pfam Myb-like DNA-binding domain 102 147 IPR001005 -
Mibi05g0821 221 CDD SANT 51 96 IPR001005 -
Mibi05g0821 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 151 IPR017930 -
Mibi05g0821 221 Gene3D - 49 101 - -
Mibi05g0821 221 ProSiteProfiles Myb-like domain profile. 97 147 IPR001005 -
Mibi05g0821 221 ProSiteProfiles Myb-like domain profile. 44 96 IPR001005 -
Mibi05g0821 221 Gene3D - 105 175 - -
Mibi05g0821 221 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 96 IPR017930 -
Mibi05g0821 221 FunFam MYB-related transcription factor 48 101 - -
Mibi05g0821 221 CDD SANT 106 147 IPR001005 -
Mibi05g0821 221 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 40 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0821 Mibi-ChrMibi05 7772235 7773132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0821 42 170 MYB Transcription Factor Family AT5G40330 58.915 5.91e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi05g0821 Myb_DNA-binding 9.1e-19 CL0123