Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0818 ATGGGATACGCTAACAAGGTTGTGCTGATCCTTCCCACGCAGATCAGAGTAACAGTCGCGGACCATATTGATGAAGAAGGGAAGAAGGTTTCTGCATTGCCGGAGAAACTCTTCCCCAGGGATGCGGATGAAGAGGAGCATGGGGGAGTGGAAGATATGACGAGGCTGGCTTACTTGAATGAGCCGGGAGTTTTGTATAATCTTCAAAGAAGATATGCCCTGAATGATATATATACATATACAGGGAGCATTTTGATAGCTGTTAATCCATTCACAAAGCTTCCTCATCTGTATGATATTCATATGATGGAGCAGTATAAAGGAGCTCCATTTGGTGAACTTAGTCCTCATGTATTTGCTGTTGCTGATGCTTCTTATAGAGCAATGATGAATGAAGGTCAAAGCCAGTCTATTTTGGTCAGTGGTGAAAGTGGTGCAGGGAAAACTGAGACAACAAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGACGTGCTGCTGGTGATGACAGGACAGTTGAGCAACAAGTTCTTGAATCCAACCCCCTCTTGGAGGCTTTTGGTAATGCAAGGACCGTCAGGAATGACAATTCAAGCCGCTTCGGGAAATTTGTTGAAATCCAGTTCGATTCAAATGGTAGAATATCTGGTGCTGCTATTCGAACTTACTTACTAGAAAGGTCACGAGTAGTGCAGATAACAGATCCTGAAAGAAACTATCACTGCTTTTATCAGTTGTGTTCATCTGAAATGGATGCTGAGAAGTATAAGTTAGGACATCCAAGCCACTTTCACTATTTAAATCAAAGTAAAACATATGAATTGGAAGGAGTAAGTAGTGCTGAAGAATACATGAAGACAAGGAGGGCAATGGATATAGTTGGTATTAGCCATGAGGATCAGGAAGCCATCTTCCGCACATTAGCTGGAATTTTACATTTGGGGAACATTGAATTTTCTCCCGGAAAAGAACACGACTCATCAGAAATAAAAGATGAGAAGTCAAGGTCTCATTTGGAGATGGCAGCAGATCTCTTCATGTGTGATGTGAATCTATTGTTAGCAACATTGTGTACTCGCTCAATACAAACCCATGAAGGAAGTATTGTGAAAGCTCTTGATTGCAATGCAGCTGTTGCTGGTCGGGATGCTTTGGCTAAAACTGTTTATTCCCGCCTATTTGACTGGCTAGTTGAAAAGATCAACAAGTCTGTTGGTCAAGATAATAATTCCCGGATGCAAATTGGAGTTTTGGATATATATGGTTTTGAGTGCTTTAAGGATAACAGTTTTGAGCAATTCTGTATCAACTTTGCAAACGAAAAGCTCCAGCAGCATTTTAACGAGCATGTATTCAAGATGGAGCAGGAGGAGTACAGTAAAGAAGAAATTAACTGGAGTTATATTGAGTTTATTGATAACCAAGATGTTTTAGACTTGATTGAAAAGAAACCAATTGGCATTATTGCACTGTTGGATGAAGCTTGCATGTTTCCAAAGTCAACTCATCAAACATTCTCAACCAAGTTGTTTCGGCATTTCCAGTCGCACCCAAGGTTGGCAAAAGAAAAGTTCTCAGAAACTGATTTCAAAATCTCTCATTATGCCGGAAAGGTCACTTATCATACAGATAGCTTTTTGGACAAAAATCGTGACTATGTTGTTGTTGAACATTGCAATCTATTGTGTTCTTCCAAATGTCCCTTTGTATGCAAACTCTTCCCTCTTCTTCCAGAGGAATCTTCTTCTAGATCATCATACAAGTTTTCTTCGGTAGCCTCCAGATTTAAGCAACAACTTCAAGCATTGATGGAGACTCTTAACACGACAGAGCCTCATTATATACGATGTGTGAAGCCAAATTCTTTGAATCGGCCGCAAAGGTTTGAGAACTCAAGTGTGATACATCAATTACGCTGTGGGGGTGTCCTTGAGGCTGTTCGAATTAGTCTTGCAGGTTACCCCACTCGTAGGACTTACTCAGAGTTTGTTCATCGCTTTGGGTTGATAGCTCCTGAATTTATGGATGGCAGTTATGATGAAATAACCACCACAGCAAAAATTTTACAGAAGCTAAAGCTTGAGAATTTTCAGTTGGGTAGGACCAAAGTATTTCTCAGGGCTGGTCAAATTGGAATTTTAGATTCCAGGCGCACTGAAGTGTTGGACAATGCTGCAAAGTGTATTCAACGTCGACTGAGAACATTTGTTACACACAGAGAATTTACCTCCATCCGAGCTGCTGCATTTTCTATTCAGGCATACTGCAGGGGATGTCTTGCTCGGAAAATGTATACTACTAAGCGGGAGACAGCGGCTGCTGTTTTCGTTCAGAAACATATTCGTATGTGGTTAATGAAGCAATCGTACATAAGACTTTATTCTTCTTCTGTAACCATACAATCCTTTATTCGTGGTTTCACAACTCGCCGAAGATTCTTTCATGGAAAGGAACACAGAGCTGCTACTGTTATTCAGGCTTGCTGGAAGATGTACAAAATTCGGTCTGTTTTCCAAAATCGTCAATCTTCAATCGTGGCAATACAATGTTTATGGCGGTGTAAGCAAGCCAAAAGAGAGCTCCGTAGATTGAAACAAGAGGCTAATGAAGCTGGTGCCTTGCGTCTGGCTAAGAATAAACTTGAGAAGCAATTGGAAGATCTAACATGGCGTTTGCATCTTGAAAAAAGATTAAGGGTTTCTAATGAAGAGGCTAAACAAGTGGAGATGTCAAAACTTCAAAAGATGTTAGAAGCTCAAAATCTTGAATTGGATGCAGCTAAATTAGCAACAATTAATGAGTGTAACAAGAATGCTATGCTTCAAAATCAATTGGAATTGTCAGTAAAGGAGAAATCAGCCTTAGAAAGGGATTTAGTTGCAATGGACGAACTGCGGAGAGAAAATGCTGCGCTAAAGAGTTCGTTGGATACCTTTGAAAAGAAGAATGCAGCTTTGGAGCTTGAGCTTAGGAAGGCTCATAAAGATAGTGATGAAACCATTGAGAAATTGAGGGAGGTTGAACAGAAATGTTCTCAATTTCAGCAAAATGTGAAAAGTCTTGAGGATAAGTTATCAACTTTAGAGGATGAAAATCATGTCCTCCGTCAGAAAGCCTTGAATCCATCTCCTAAGAGTGGACACCCAGCTTTTGCAAAGTCGTTTTCAGAAAAGTACTCAAATTCAGTGGCTCCCAGGACAGAACGAAAGCACATATTTGAGTCACCCACACCCACTAAACTTATTGCCCCATTTCCACTTGGCTTGTCAGACTCTCGTAGATCTAAGTTAACTGCAGAGAGACACCAGGATAACTTTGAATTCCTCTCTAGATGTATCAAGGAAGATTTGGGGTTCAAAAATGGGAAACCATTGGCAGCATGCATCATATACAAGTGTCTTCTTCATTGGCATGCCTTTGAATCTGAGAGAACTGCCATTTTTGATTACATAATCGAGGGAATTAATGAAGCCTTAAAGGCTAGAGATGATGATTCTCTCTTACCATATTGGCTGTCCAATACCTCAGCACTTTTGTGCCTCCTACAGAGGAACCTACGTTCAAATGGATTTCTTGCTACTACTGCCCATCGCTACACTGGATCTTCTGGCTTGACCAGCCGAATTGGGCATGGACTGAAATCTCCACTAAAATTCATTGGATATGATGATGGTATGTCGCATGTAGAGGCAAGATATCCAGCTATACTTTTCAAACAACAATTGACTGCTTGTGTAGAGAAGATTTTCGGCCTGATACGTGATAATTTGAAAAAGGAGCTTTCTCCACTGTTGAGTTCGTGCATTCAGGCACCAAAAACAGCACGAGTGCATGGGGGAAAATCATCCCGGTCTCCTGGTGGACTTGCTCAGCAACCTCCTGGTGGTCAATGGGACAACATCATTAAATTTTTGGATTCACTTATGAGCCGACTGCGTGGGAATCATGTACCATCCTTCTTCATACGAAAACTAGTTACTCAAGTTTTCTCTTTCATCAACATAACACTCTTCAACAGTCTTCTCTTGCGGCGTGAATGTTGTACATTCTCAAATGGGGAATATGTGAAATCTGGTCTAGCCGAACTGGAGAAGTGGATAGCTAATGCAAAGGAAGAGTATGCAGGAACATCGTGGCATGAGCTAAACTATATAAGACAAGCTGTTGGGTTTCTGGTGATTCATCAAAAGAGGAAGAAATCCTTGGAAGAGATTCGACAGGATCTTTGTCCGGCATTGACTGTGAGGCAAATCTATCGCATTAGTACTATGTATTGGGATGACAAATATGGAACGCAAAGTGTATCCAATGAGGTAGTTAGTGAAATGAGGGAAATTGTGAGCAAGGACAATCAAAACCTGACTTCAAATTCATTCTTGTTGGATGATGATCTGAGCATTCCATTTTCTGCTGAAGACATAGATATGGCAATATCAGCAATAGATCCTGATGACCTTGATCACCCACCATTTTTGTCGGAATATCCTTGTGCCCAATTTCTTCTTGCACATTAG 4515 0.4078 MGYANKVVLILPTQIRVTVADHIDEEGKKVSALPEKLFPRDADEEEHGGVEDMTRLAYLNEPGVLYNLQRRYALNDIYTYTGSILIAVNPFTKLPHLYDIHMMEQYKGAPFGELSPHVFAVADASYRAMMNEGQSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCSSEMDAEKYKLGHPSHFHYLNQSKTYELEGVSSAEEYMKTRRAMDIVGISHEDQEAIFRTLAGILHLGNIEFSPGKEHDSSEIKDEKSRSHLEMAADLFMCDVNLLLATLCTRSIQTHEGSIVKALDCNAAVAGRDALAKTVYSRLFDWLVEKINKSVGQDNNSRMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHQTFSTKLFRHFQSHPRLAKEKFSETDFKISHYAGKVTYHTDSFLDKNRDYVVVEHCNLLCSSKCPFVCKLFPLLPEESSSRSSYKFSSVASRFKQQLQALMETLNTTEPHYIRCVKPNSLNRPQRFENSSVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVHRFGLIAPEFMDGSYDEITTTAKILQKLKLENFQLGRTKVFLRAGQIGILDSRRTEVLDNAAKCIQRRLRTFVTHREFTSIRAAAFSIQAYCRGCLARKMYTTKRETAAAVFVQKHIRMWLMKQSYIRLYSSSVTIQSFIRGFTTRRRFFHGKEHRAATVIQACWKMYKIRSVFQNRQSSIVAIQCLWRCKQAKRELRRLKQEANEAGALRLAKNKLEKQLEDLTWRLHLEKRLRVSNEEAKQVEMSKLQKMLEAQNLELDAAKLATINECNKNAMLQNQLELSVKEKSALERDLVAMDELRRENAALKSSLDTFEKKNAALELELRKAHKDSDETIEKLREVEQKCSQFQQNVKSLEDKLSTLEDENHVLRQKALNPSPKSGHPAFAKSFSEKYSNSVAPRTERKHIFESPTPTKLIAPFPLGLSDSRRSKLTAERHQDNFEFLSRCIKEDLGFKNGKPLAACIIYKCLLHWHAFESERTAIFDYIIEGINEALKARDDDSLLPYWLSNTSALLCLLQRNLRSNGFLATTAHRYTGSSGLTSRIGHGLKSPLKFIGYDDGMSHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLSSCIQAPKTARVHGGKSSRSPGGLAQQPPGGQWDNIIKFLDSLMSRLRGNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIANAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSEMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAISAIDPDDLDHPPFLSEYPCAQFLLAH 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0818 1504 SMART iq_5 744 766 IPR000048 GO:0005515
Mibi05g0818 1504 SMART iq_5 792 814 IPR000048 GO:0005515
Mibi05g0818 1504 SMART iq_5 721 743 IPR000048 GO:0005515
Mibi05g0818 1504 SMART iq_5 840 862 IPR000048 GO:0005515
Mibi05g0818 1504 SMART iq_5 817 839 IPR000048 GO:0005515
Mibi05g0818 1504 SMART iq_5 769 791 IPR000048 GO:0005515
Mibi05g0818 1504 Coils Coil 962 1038 - -
Mibi05g0818 1504 SMART DIL_2 1324 1431 IPR002710 -
Mibi05g0818 1504 Gene3D - 424 610 - -
Mibi05g0818 1504 Coils Coil 910 930 - -
Mibi05g0818 1504 Pfam IQ calmodulin-binding motif 771 790 IPR000048 GO:0005515
Mibi05g0818 1504 Pfam IQ calmodulin-binding motif 746 763 IPR000048 GO:0005515
Mibi05g0818 1504 Pfam IQ calmodulin-binding motif 819 838 IPR000048 GO:0005515
Mibi05g0818 1504 Pfam IQ calmodulin-binding motif 796 813 IPR000048 GO:0005515
Mibi05g0818 1504 Gene3D - 238 295 - -
Mibi05g0818 1504 Pfam Myosin head (motor domain) 50 707 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi05g0818 1504 ProSiteProfiles IQ motif profile. 745 774 IPR000048 GO:0005515
Mibi05g0818 1504 CDD MYSc_Myo11 62 707 IPR036018 -
Mibi05g0818 1504 ProSiteProfiles Dilute domain profile. 1149 1449 IPR002710 -
Mibi05g0818 1504 ProSiteProfiles Myosin motor domain profile. 48 719 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi05g0818 1504 ProSiteProfiles IQ motif profile. 793 822 IPR000048 GO:0005515
Mibi05g0818 1504 SMART MYSc_2a 42 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi05g0818 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 769 IPR027417 -
Mibi05g0818 1504 Gene3D - 819 869 - -
Mibi05g0818 1504 Gene3D - 772 818 - -
Mibi05g0818 1504 Gene3D - 721 771 - -
Mibi05g0818 1504 Gene3D - 654 720 - -
Mibi05g0818 1504 Gene3D Kinesin motor domain 51 649 IPR036961 -
Mibi05g0818 1504 Coils Coil 938 958 - -
Mibi05g0818 1504 FunFam Myosin heavy chain 238 292 - -
Mibi05g0818 1504 Gene3D Myosin VI head, motor domain, U50 subdomain 297 588 - -
Mibi05g0818 1504 Coils Coil 847 898 - -
Mibi05g0818 1504 PANTHER MYOSIN 797 1438 - -
Mibi05g0818 1504 PRINTS Myosin heavy chain signature 78 97 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi05g0818 1504 PRINTS Myosin heavy chain signature 182 209 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi05g0818 1504 PRINTS Myosin heavy chain signature 135 160 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi05g0818 1504 PRINTS Myosin heavy chain signature 414 442 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi05g0818 1504 PRINTS Myosin heavy chain signature 467 495 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi05g0818 1504 CDD MyosinXI_CBD 1100 1472 IPR037975 GO:0007015
Mibi05g0818 1504 ProSiteProfiles IQ motif profile. 818 847 IPR000048 GO:0005515
Mibi05g0818 1504 MobiDBLite consensus disorder prediction 1276 1295 - -
Mibi05g0818 1504 Pfam DIL domain 1325 1428 IPR002710 -
Mibi05g0818 1504 ProSiteProfiles IQ motif profile. 841 870 IPR000048 GO:0005515
Mibi05g0818 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 770 868 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0818 Mibi-ChrMibi05 7728546 7748526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0818 27 1502 Myosins gene family AT4G33200 74.882 0.0 2270