Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0814 ATGATCAAGTGTCTAGAAGTCAAGGAATCTCTGAGAGTAGTTTGGCGAAAGTGGGGCTATAAATTCCTCTCCTTGAACTCATTTTACATTGCCATTTATGTCGTCTTCCTCATTCACATTCAAAAGCTGAGATTTTTATTTTGTATTTGTGAACTGTGCATATATATCATGATTCATAAGAAGATTACATGGAGGTCTATCATCTGGATGTTCAGTTGTTACAAGACAAAATGCCCACTGAAGGAATCCAAAAAGAAGATCTCCAAGCAAGGTTCTTTTCAGAGACTGAGCCTTTCTGATATCAGCATTTCAAGCTCTGGTCAGGCCATTGAAGATCTTTCTATCTCTCTTGTTGGGCAAAAGCTTTATCCTTTTACCCTTGAAGAGCTAATAGAAGCTACACATAATTTCTCTTGGAGTAATATGATAGGTGAAGGTGGGTTTGGACCTGTGTACAAGGGATTTGTTGATGACAAGATCAGACCCGGTTTGAAAGCTCAATCTGTGGCTGTGAAACGATTAAACTTGGATGGTATGCAAGGTCATAGGGAATGGCTGGCAGAGATAATCTTTCTTGGACAACTAAAGCATCCAAATCTTGTTGACTTACTTGGTTACTGTTATGAGGAGGAACACAGGCTTTTAGTATATGAATACATCCCAAGAGGCAGCTTGGAGTGCCAACTCTTTAGAAGATACACTGCAGCCTTACCATGGTCAACCAGAATAAAAATTGCCTTGGGAGCAGCCAAGGGACTAGCCTTCCTTCATGGAGCAGACAAACCTGTAATATACAGAGATTTTAAAACTTCAAATATCTTATTAGACTCGGACTATACAGCAAAATTGTCAGACTTTGGGTTTGCAAAAGATGGACCTGAAGGGGAAGACACACATGTAACAACAAGAGTAATAGGAACACAGGGCTATGCTGCACCAGAGTACATAATGACAGGTCACCTTACTACCAAAAGCGACGTGTATAGTTATGGAGTGGTGCTATTAGAACTGATAACAGGAAGAAGGATAATGGATAAGACCAGGCCAAATAGAGAGCAGAGCCTAGTAGAATGGGCGAGGCCTCTATTGAGGGATCATAGGAAGATCCACCAGTTTATAGACCCTCGACTTGAAGGAAGATTTCCTATCAAAGGGGCTCATAAAGTTGCTTCCCTGACTTACAAGTGCTTGAGCCACCAACCACATCCTAGGCCCACTATGAGCGATGTGGTCAACATATTGGAGCCACTTCAGCATTTTGACGATGCTTTCATAGAACCCTTTGTGTATGTAGCTATTAACGAAGATGGTAACATCAACTAA 1323 0.4112 MIKCLEVKESLRVVWRKWGYKFLSLNSFYIAIYVVFLIHIQKLRFLFCICELCIYIMIHKKITWRSIIWMFSCYKTKCPLKESKKKISKQGSFQRLSLSDISISSSGQAIEDLSISLVGQKLYPFTLEELIEATHNFSWSNMIGEGGFGPVYKGFVDDKIRPGLKAQSVAVKRLNLDGMQGHREWLAEIIFLGQLKHPNLVDLLGYCYEEEHRLLVYEYIPRGSLECQLFRRYTAALPWSTRIKIALGAAKGLAFLHGADKPVIYRDFKTSNILLDSDYTAKLSDFGFAKDGPEGEDTHVTTRVIGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELITGRRIMDKTRPNREQSLVEWARPLLRDHRKIHQFIDPRLEGRFPIKGAHKVASLTYKCLSHQPHPRPTMSDVVNILEPLQHFDDAFIEPFVYVAINEDGNIN 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0814 440 CDD STKc_IRAK 143 417 - -
Mibi05g0814 440 FunFam Serine/threonine-protein kinase PBS1 220 425 - -
Mibi05g0814 440 FunFam Serine/threonine-protein kinase BIK1 104 219 - -
Mibi05g0814 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Mibi05g0814 440 ProSiteProfiles Protein kinase domain profile. 137 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0814 440 SUPERFAMILY Protein kinase-like (PK-like) 114 417 IPR011009 -
Mibi05g0814 440 Gene3D Transferase(Phosphotransferase) domain 1 220 426 - -
Mibi05g0814 440 Gene3D Phosphorylase Kinase; domain 1 98 219 - -
Mibi05g0814 440 PANTHER OS01G0588500 PROTEIN-RELATED 95 418 - -
Mibi05g0814 440 Pfam Protein tyrosine and serine/threonine kinase 139 414 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0814 Mibi-ChrMibi05 7704429 7706038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0814 125 414 Glycoside Hydrolase AT3G07070 52.901 5.59e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi05g0814 PK_Tyr_Ser-Thr 2.2e-46 CL0016