Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0801 ATGGAATCGGAGGACTCTTTGAAACTTCAATTGGAGGAATTGCAGAAACATTTTGGGAAGAAGCAAAAGTTCGAGGACGCTGTCTTCTCCCTTAAATCCCTCCTTCTACACAATTACCCATCCGCTTCTCCCTCTCTCCGCAAATCCTTTTATGCGGCTATATGCCGAGTTGCTACTGTATTGAAGACCAGGTATACAGCACCAGGTTTCTGGAATGCTGGGCTGGGGCTTTTTGAGCAGGCTGAATTGCTTGTTTCTGATCCATCTGAGAAGGAACACTTGAGGGGTTGCATTTCTCAGGCGAGGGCAGAGTTGCATCTTGAGGATAATCCTACACAAGCTTCACAACCACCTCAAAATCCTGTCAATGGAGGATATCTTTTTGAGGGACACCTTACCGTAGATCCAGAGCCACCTCAGCCTCAATGGCTGGTGCAGTCAAACTTATTGACTACAGCTGCTACGCTATTTGCTGCTGAATCATCTCAAGGCTTGGCGGCAGATGATACTTCACGGGAAAATGCTGCAAATATGCTTCAGGATCTTCTGAATAGATTAGAAGATGCCGTGCCACTGATGCTGAGTGATGGTCCAGCACCTCCAAAAGTCCCTCCTGCTAGCAAAGAAGTTGTGGCAAAACTTCCCGTCATTACTCTTACTGAGGAAATCCTGGCTAAACTGGGGAAAGATGCAGAGTGTGCAATTTGCAAGGAGAACTTGGCTCTAAATGACAAAATGCAGGAGTTGCCATGCAGGCACACATTCCACCCACCTTGTCTTAAGCCATGGCTGGACGAGCATAATTCATGCCCTATTTGTCGGTATGAGCTGCAAACTGATGACCATGCCTATGAGAGCTGGAAGGAGCGTGAGAAGGAAGCAGAAGAAGAGAGGAAGGGTGCTGAAAATGCCGTTCGTGGTGGTGAATATATGTATGTTTAA 942 0.4692 MESEDSLKLQLEELQKHFGKKQKFEDAVFSLKSLLLHNYPSASPSLRKSFYAAICRVATVLKTRYTAPGFWNAGLGLFEQAELLVSDPSEKEHLRGCISQARAELHLEDNPTQASQPPQNPVNGGYLFEGHLTVDPEPPQPQWLVQSNLLTTAATLFAAESSQGLAADDTSRENAANMLQDLLNRLEDAVPLMLSDGPAPPKVPPASKEVVAKLPVITLTEEILAKLGKDAECAICKENLALNDKMQELPCRHTFHPPCLKPWLDEHNSCPICRYELQTDDHAYESWKEREKEAEEERKGAENAVRGGEYMYV 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0801 313 SUPERFAMILY RING/U-box 227 280 - -
Mibi05g0801 313 MobiDBLite consensus disorder prediction 289 313 - -
Mibi05g0801 313 ProSiteProfiles Zinc finger RING-type profile. 233 274 IPR001841 -
Mibi05g0801 313 Coils Coil 284 304 - -
Mibi05g0801 313 Pfam Ring finger domain 232 274 IPR001841 -
Mibi05g0801 313 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 199 280 IPR013083 -
Mibi05g0801 313 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 128 277 - -
Mibi05g0801 313 MobiDBLite consensus disorder prediction 289 304 - -
Mibi05g0801 313 FunFam E3 ubiquitin-protein ligase RNF181 195 280 - -
Mibi05g0801 313 SMART ring_2 233 273 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0801 Mibi-ChrMibi05 7561915 7564031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0801 7 313 C3H Transcription Factor Family AT5G20910 65.260 1.17e-133 380