Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0798 ATGGTTTGTGAGATGGAGAATGACTATATCGAGGACATGGACATCGAAATCCTCCATTCAATGTGGCCTGAAGATATTGGAACTGATGTTGGGAGAAAATTTAATATAGAAAAGCCTGGAAAGGACCAAGATATGTTGGAAGAGATTATAATGATGGAATCAACTATAGTTGATTTCAAGCATCTCATGGAGCTTACAAATTATACTGATAAAGGGTCTTCTCAACTTTCCCACCTTATGAAACACTTGGAGTACAAGCAGGCCAACGCCGTGCGCCTTCTCAGAGAAGAACTTGACAATTTAAGCAAACAGAGGCATGAGGTTGAGCTGAGGAAGTTGCAGATATTGGAGGAGCTTCAATTTGAGGAAGAAACATATGGGGACAAACGTCCAGTTTCTATTTTGGATGAAATATATGATCTATGGCAAGATGTACCACACAGGAAATGTGATGTTATTGTTCAGAACAAGAGAATTGAGATAGATGCTGAGTATGATACAACTGTGTATTGGAAACAGAAGGCACTGGATTTGGAAAAAATGTTGGAGGCAAGTGTCCAAAGAGAGCAGATACTTGCAGAAAAGTTGCAAGAAAGTATAAGGAATCTTGAGAAGCAGTCCTCACCTGTAGAAGAATTGTCTCAGATTCTGAAAAGGGCAGATAATTTCTTGCATTTTGTACTTCAGAATGCACCTGTGGTTATTGGTCATCAGGACAAAGAGTTGCGTTATCGATTTATCTATAATCATTTTCCAAGTTTGCACGAGGAGGACATCATTGGAAAAACAGATATTGAAATTTTTACAGGATCTGGTGTTAAGGAATCTCAAGATTTTAAGAGAGAAGTTCTGGAAAAAGGCTTGCCTGCGAAAAGGGAAATTACTTTTGAGACAGAGTTATTTGGGTCAAAGACATTCTTGATTTATGTAGAACCTGTCTTCAGCAAGACAGGGGAGACCCTTGGAATAAACTATATGGGAATGGATGTCACAGATCAGGTGAGAAAAAGAGAAAGGATGATGAAGATTCGGGAAGAAATTGCGGTTCAGAAAGCCAAGGAAACAGAACTGAATAAAACCATCCACATTACAGAGGAGACTATGAGAGCAAAACAAATGTTGGCAACCATGTCTCATGAGATAAGATCACCATTGTCTGGGGTTGTTAGCATGGCTGAAATTCTTTCTAGGACAAAACTTGATCGCGAGCAAAGACAACTCTTGAATGTCATGCTATCTTCAGGAGATTTGGTTCTTCAACTTATAAATGACATACTTGATCTTTCCAAGGTTGAGTCAGGAGTTATGAAGTTAGAAGCAACCAAGTTCCGTCCAAGAGAGGTAGTAAAGCATGTACTCCAGACTGCTGCAGCTTCACTGCAGAAAATATTGACCTTAGAAGGACATGTAGCAGATGATGTTCCAACTGAGGTCATCGGAGATGTCTTAAGGATTCGGCAAATCCTCACAAATTTAGTCAGTAACGCTATCAAGTTTACTCATGAAGGCAAGGTTGGAATAAATCTTTACGTTGTGCCAGAGCCAGCTTTTGTTAAAGCAGAAGCAAGCCTCCAGGAGACTAGTGCAGATGACCGGTCTAATATTTCAGGGAATGGAGTAGTAGAAGAGAAGAAGCATCTCTCAACATCTCAAAATAGCAGTAGCCAAAACCATGCATTGGGTGATGAAGGTAGATCTCCGGTTAAAAGCGAATGCTTCATGAATGGAGGTACTGAGGAGCAACCTCCCTCAACTGAAACAACAGTGTGGATACGTTGTAATGTCTGTGACTCAGGAATTGGAATACCAGAGAAGGCTATACCTACTTTGTTTAAAAGGTACATGCAAGCCAGTGCAGACCATGCAAGAAAGTATGGTGGGACGGGCCTAGGACTAGCAATATGCAAACAACTGGTTGAGTTAATGGGTGGTCGTCTTACAGTAACTAGCAAAGAACATTGTGGTTCTACATTTACCTTCATATTGCCATACAAGGTTTCAACTATTTGTGATCATTCTGAAGAGCCCTCAGATACAGAGGATGATGATGATGATGCATCTGATGATACCACAGAGGGCTTCTTCCAGTTTCAACCACCCTCTTTGGGCTCTCTATTCTCCTCGTATGGATCTAGCAGGACCCAAAAGTTATCACCTCAAAAAGCTGGATTTTCAGATAATTCCTTCACGGTGTCCTCTAATAATGTTGAATCGAAGGAAATAACTTCAGTTGAGGATGCATCCTCAATAACTGATGGCCCAGAGATGTCTGAATGTTCATGCTCATCAACTCACAGGCCAGAGGTAGAGAATGAAAATGTCTATACAAGAAACAAATCACGAAATGGCAGTGCAGATTTTTCAGCTATAGCAACAATGTCAAGAGAGCAAACACATCAAAGTCAAGAAAGAGGAGATATTGCCTCACAATGTGTCACTAGCAGCAGTACTTCAGAAGTAGCAGAACCAAATTTGAAGCCCAAGATCCTTCTAGTTGAGGATAACAAGATCAATGTCATGGTGACACAGTCAATGATGAAGCAACTAGGTCATAGCATAGATGTTGTGAATAATGGAGTGGAAGCTGTACGTGCCGTTCTGCGCCAGAGTTATGACCTAATTCTCATGGACGTCTGCATGCCAATTATGAATGGTCTGCAAACAACAAAATTGATTCGATCTTTTGAAGAAACGGGTAACTGGGATGCTGCAAGAGAATTTGGAATTGAGCTAAATCTACCAGCTTCATCATGTTTGCATAATAGTGAATTTTGTTTACCTGCCACCAAGTCAAACCACATCCCCATTATTGCGATGACAGCAAATGCCTTGTCAGAGAGTGCTGAAGAATGTTTTGCAAATGGTATGGACTCATTTGTATCAAAACCTGTGACTTTCCAAAAATTGAAAGATTGTCTTGAACAGTACTTACAGTGA 2937 0.4048 MVCEMENDYIEDMDIEILHSMWPEDIGTDVGRKFNIEKPGKDQDMLEEIIMMESTIVDFKHLMELTNYTDKGSSQLSHLMKHLEYKQANAVRLLREELDNLSKQRHEVELRKLQILEELQFEEETYGDKRPVSILDEIYDLWQDVPHRKCDVIVQNKRIEIDAEYDTTVYWKQKALDLEKMLEASVQREQILAEKLQESIRNLEKQSSPVEELSQILKRADNFLHFVLQNAPVVIGHQDKELRYRFIYNHFPSLHEEDIIGKTDIEIFTGSGVKESQDFKREVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKTGETLGINYMGMDVTDQVRKRERMMKIREEIAVQKAKETELNKTIHITEETMRAKQMLATMSHEIRSPLSGVVSMAEILSRTKLDREQRQLLNVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKILTLEGHVADDVPTEVIGDVLRIRQILTNLVSNAIKFTHEGKVGINLYVVPEPAFVKAEASLQETSADDRSNISGNGVVEEKKHLSTSQNSSSQNHALGDEGRSPVKSECFMNGGTEEQPPSTETTVWIRCNVCDSGIGIPEKAIPTLFKRYMQASADHARKYGGTGLGLAICKQLVELMGGRLTVTSKEHCGSTFTFILPYKVSTICDHSEEPSDTEDDDDDASDDTTEGFFQFQPPSLGSLFSSYGSSRTQKLSPQKAGFSDNSFTVSSNNVESKEITSVEDASSITDGPEMSECSCSSTHRPEVENENVYTRNKSRNGSADFSAIATMSREQTHQSQERGDIASQCVTSSSTSEVAEPNLKPKILLVEDNKINVMVTQSMMKQLGHSIDVVNNGVEAVRAVLRQSYDLILMDVCMPIMNGLQTTKLIRSFEETGNWDAAREFGIELNLPASSCLHNSEFCLPATKSNHIPIIAMTANALSESAEECFANGMDSFVSKPVTFQKLKDCLEQYLQ 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0798 978 SMART HisKA_10 369 434 IPR003661 GO:0000155|GO:0007165
Mibi05g0798 978 Coils Coil 186 206 - -
Mibi05g0798 978 MobiDBLite consensus disorder prediction 793 819 - -
Mibi05g0798 978 Gene3D PAS domain 211 345 - -
Mibi05g0798 978 PRINTS Bacterial sensor protein C-terminal signature 626 644 IPR004358 GO:0016310|GO:0016772
Mibi05g0798 978 PRINTS Bacterial sensor protein C-terminal signature 591 605 IPR004358 GO:0016310|GO:0016772
Mibi05g0798 978 PRINTS Bacterial sensor protein C-terminal signature 650 663 IPR004358 GO:0016310|GO:0016772
Mibi05g0798 978 Pfam His Kinase A (phospho-acceptor) domain 371 434 IPR003661 GO:0000155|GO:0007165
Mibi05g0798 978 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 12 977 - -
Mibi05g0798 978 MobiDBLite consensus disorder prediction 735 769 - -
Mibi05g0798 978 MobiDBLite consensus disorder prediction 543 585 - -
Mibi05g0798 978 CDD HATPase_EvgS-ArcB-TorS-like 485 663 - -
Mibi05g0798 978 SUPERFAMILY CheY-like 827 978 IPR011006 -
Mibi05g0798 978 Pfam Response regulator receiver domain 829 896 IPR001789 GO:0000160
Mibi05g0798 978 Gene3D - 357 434 - -
Mibi05g0798 978 Gene3D - 435 670 IPR036890 -
Mibi05g0798 978 MobiDBLite consensus disorder prediction 543 561 - -
Mibi05g0798 978 SMART HKATPase_4 480 666 IPR003594 -
Mibi05g0798 978 FunFam Histidine kinase 5 821 978 - -
Mibi05g0798 978 CDD REC_hyHK_CKI1_RcsC-like 829 973 - -
Mibi05g0798 978 FunFam Histidine kinase 5 211 346 - -
Mibi05g0798 978 ProSiteProfiles Histidine kinase domain profile. 376 666 IPR005467 -
Mibi05g0798 978 FunFam Putative histidine kinase 5 357 434 - -
Mibi05g0798 978 ProSiteProfiles Response regulatory domain profile. 828 977 IPR001789 GO:0000160
Mibi05g0798 978 MobiDBLite consensus disorder prediction 675 690 - -
Mibi05g0798 978 Gene3D - 823 978 - -
Mibi05g0798 978 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 368 434 IPR036097 GO:0000155|GO:0007165
Mibi05g0798 978 Coils Coil 91 118 - -
Mibi05g0798 978 CDD HisKA 368 430 IPR003661 GO:0000155|GO:0007165
Mibi05g0798 978 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 423 665 IPR036890 -
Mibi05g0798 978 MobiDBLite consensus disorder prediction 672 701 - -
Mibi05g0798 978 MobiDBLite consensus disorder prediction 735 781 - -
Mibi05g0798 978 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 664 IPR003594 -
Mibi05g0798 978 SMART REC_2 827 973 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0798 Mibi-ChrMibi05 7514902 7519411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0798 1 978 Histidine Kinase Gene Family AT5G10720 58.308 0.0 1109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi05g0798 HATPase_c 3.2e-27 CL0025