Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0794 ATGACAAAATCCATGCAGGCCGCAACACCTCACCACCTCTTAAGAAGCCAAGTGGGGTCCACTCCCTACAAGGACGACCATTTTCTCCTACTCCATCCCCACCCCCACATTTCTTGCTCCGTAGCATTTTTGGCTAAGCCTTGCCCACGTATAGATCACAAAAACCACTCTCAATTAATCACGCTTCTTCCTCAACCACCCATAAACAACATTTCCCTCCCTCCCTCACTTCACACTTCATTCCCTACCTACCTTCCTTCTCCTCCTCCCATGGCTTCCAAGCTCTGTGACTCCTGTAAATCCGCCACCGCCTCTCTCTTCTGCCGTGCCGACTCCGCCTTCCTCTGCCTAGGCTGTGACTCCAAAATCCATGCCGCCAACAAGCTCGCTTCCCGCCACGCACGTGTGTGGGTCTGCGAAGTGTGCGAGCAAGCTCCTGCTCACGTCACCTGCAAGGCCGACGCCGCCGCTCTCTGCGTCACCTGCGACCGTGACATCCACTCTGCGAATCCACTCGCTCGCCGTCACGAGCGCCTCCCTGTAACTCCGTTCTACGATCCCGTCCACTCCGTCGGTGCTCCGTCCGGCGCTGGTGCCGCGATTAACTTCCTTAACGACCGTTACTTCTCCGACGGTGATGCCGATGCTGACGTCAGCAGGGAGGAGGCGGAGGCTGCTTCATGGCTGTTGCCTAATCCTTCGAATCCGAATAATAAGGCTGTGGAGAGTCCGAGTCCAGATCTGAACTCTGGTTGTGAGTATGTGTTCACTGAAATGGAGCCTTGTCTGGATCTGGATTTTGGACCTGTGGATCCGAAGGTGGAGGATGCTCAGGAGCAGAATAGTTCCGGTACGGACGGTGTTGTTCCGGTACAGAGCAAGAGTGCTCAGATTCCGTCGCTTAACGATCACTACTATGACATGGAATTGACTGGTTCCAAGAATTTCAACTACGGTTACAACGGTAGTCAGTGCCTGAGCCAAAGTGTGTCGTCGTCTTCCATGGAGGTTGGAGTAGTTCCAGATGGGAATGCGTTATCGAACGGCTACAGTAAGACGATGGTGGGAGGTGAGAATCAGACGGTGCAGATTTCAGCCGCAGATAGGGAAGCTAGGGTATTGAGGTACAGGGAGAAGAGGAAGAACCGAAAGTTCGAGAAGACTATTCGGTATGCTTCCAGAAAAGCATATGCTGAAACAAGACCAAGAATCAAAGGCAGATTCGCAAAACGATCGGAGGCTGATCGATTCGGAGGGTACGGCGTCGTACCAAGCTGTTGA 1281 0.534 MTKSMQAATPHHLLRSQVGSTPYKDDHFLLLHPHPHISCSVAFLAKPCPRIDHKNHSQLITLLPQPPINNISLPPSLHTSFPTYLPSPPPMASKLCDSCKSATASLFCRADSAFLCLGCDSKIHAANKLASRHARVWVCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERLPVTPFYDPVHSVGAPSGAGAAINFLNDRYFSDGDADADVSREEAEAASWLLPNPSNPNNKAVESPSPDLNSGCEYVFTEMEPCLDLDFGPVDPKVEDAQEQNSSGTDGVVPVQSKSAQIPSLNDHYYDMELTGSKNFNYGYNGSQCLSQSVSSSSMEVGVVPDGNALSNGYSKTMVGGENQTVQISAADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSEADRFGGYGVVPSC 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0794 426 Pfam B-box zinc finger 94 133 IPR000315 GO:0008270
Mibi05g0794 426 Pfam B-box zinc finger 136 181 IPR000315 GO:0008270
Mibi05g0794 426 ProSiteProfiles Zinc finger B-box type profile. 91 138 IPR000315 GO:0008270
Mibi05g0794 426 SMART bboxneu5 91 138 IPR000315 GO:0008270
Mibi05g0794 426 SMART bboxneu5 139 181 IPR000315 GO:0008270
Mibi05g0794 426 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 96 413 IPR045281 GO:0009909
Mibi05g0794 426 CDD Bbox1_BBX-like 138 181 - -
Mibi05g0794 426 ProSiteProfiles Zinc finger B-box type profile. 134 181 IPR000315 GO:0008270
Mibi05g0794 426 CDD Bbox1_BBX-like 95 138 - -
Mibi05g0794 426 ProSiteProfiles CCT domain profile. 369 411 IPR010402 GO:0005515
Mibi05g0794 426 Pfam CCT motif 369 411 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0794 Mibi-ChrMibi05 7482999 7484413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0794 91 425 C2C2-CO-like Transcription Factor Family AT5G24930 61.918 2.86e-137 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mibi05g0794 zf-B_box 1.3e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0794 05 7482999 7484413 Mibi05g0794 05 7482999 7484413 ECH