Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0777 ATGGAATCAACCTGCGTGGATACGTCTCTCAACCTCAACGTTGGTCCTCCTCCGGACACACAAGTTATTAATTCGGCTGAGGATTTGGTGCAAGAGTTACATCGTTTAAACGGTGAGAATCAAAGGTTGACAGAGAAACTGAGTTACATGAGAGAGAACTACAATCTGTTGAAAAAGCAATTGAACCAAGTGATGATCAAGAACCATAGTCCAGAAAGGGATCCAACTAATGATACTAATAATAAACAATCATCAAGGAAGAGAAGGGCAGAGAATACGGATGCCTGTATGGATAATAATATGATTAGGAATACAGAGTGCATCAGCAACATTTCAGACGAAGACTCATCATTCAGAAGGCCAGCTTCTAAGGTTTCCAGAGTTATGGTTCGCACTCAACCATCAGATACTGGCTTGTATGTGAGGGATGGATATCAGTGGAGGAAATATGGTCAGAAGATTACTCGAGATAACCCATCTCCTAGAGCTTACTTCAGGTGCTCCTTTGCCCCAACCTGCCCTGTGAAAAAGAAGGTGCAAAGAAGTGTAGAAGACCCAACAGTGTTGGTGGCAACCTACGAAGGAGAGCACAACCATGGACGAAATGGATCTGAATTACCATCAATATTAGTGTCGAATAACCAGTGCCAAAGTAGTGATGGAGCCCTTGAAAATGGTGGAAAGTCAATGCAGCAATGCTTGGTTCAACAAATGGCCACTTCTTTGACCAGAGATCCCAACTTCACTGCAGCTCTTGCCTCCGCCATCTCCGGAAGAATTTTAAACCTTGCTTCTAATTAA 801 0.4307 MESTCVDTSLNLNVGPPPDTQVINSAEDLVQELHRLNGENQRLTEKLSYMRENYNLLKKQLNQVMIKNHSPERDPTNDTNNKQSSRKRRAENTDACMDNNMIRNTECISNISDEDSSFRRPASKVSRVMVRTQPSDTGLYVRDGYQWRKYGQKITRDNPSPRAYFRCSFAPTCPVKKKVQRSVEDPTVLVATYEGEHNHGRNGSELPSILVSNNQCQSSDGALENGGKSMQQCLVQQMATSLTRDPNFTAALASAISGRILNLASN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0777 266 MobiDBLite consensus disorder prediction 71 94 - -
Mibi05g0777 266 SUPERFAMILY WRKY DNA-binding domain 139 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g0777 266 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 225 260 IPR044810 GO:0003700
Mibi05g0777 266 Pfam WRKY DNA -binding domain 143 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g0777 266 Coils Coil 26 60 - -
Mibi05g0777 266 MobiDBLite consensus disorder prediction 67 98 - -
Mibi05g0777 266 FunFam WRKY transcription factor 40 126 203 - -
Mibi05g0777 266 Gene3D WRKY domain 124 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g0777 266 SMART WRKY_cls 141 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g0777 266 ProSiteProfiles WRKY domain profile. 143 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0777 Mibi-ChrMibi05 7296279 7297657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0777 3 260 WRKY Transcription Factor Family AT1G80840 40.065 5.90e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi05g0777 WRKY 1.4e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1892 08 35770016 35771178 Mibi05g0777 05 7296279 7297657 CCT