Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0776 ATGGAGGAGGATCAGAAAAATACAGTCTTTGGAAAATACGAAATAGGTAGGCTTCTGGGTAAAGGCACTTTCGCTAAGGTTTACTACGGCAAAGAGATAGCCACCGGAGAAAGCGTGGCCATCAAGATCGTGAGCAAAGAGCAGGTAAGAAAGGAAGGTATGATGGAACAGATCAAGCGTGAGATTTCTGTTATGCGTCTAGTTCGTCATCCTAACGTGGTTGAGCTCAAAGAAGTGATGGCCACAAAGACCAAGATTTTCTTCGTCATGGAGTACGTTCGCGGCGGCGAACTCTTCGCCAAGGTCGCCAGAGGAAAACTCAAAGAAGAAGTCGCTCGGAAATACTTCCAACAGTTAATCAGCGCCGTTGATTTCTGTCACAGCAGAGGAGTATCTCACCGTGATCTCAAGCCTGAAAATCTGTTGCTAGATGAGAACGAGAATCTCAAGATCTCCGATTTTGGCCTCTCGGCGTTGCCGGAGCAACTGCGTCAAGACGGTCTCCTCCACACACAGTGTGGTACTCCGGCGTATGTGGCCCCTGAAGTGTTAAGGAAGAAAGGGTATGATGGATCTAAGGCTGATATATGGTCATGTGGTGTGATTTTATATGCATTGCTTGCTGGGTTTCTTCCTTTCCAGAATGAGAACCTCATGAGTATGTATAGCAAGGTTTTGAAAGCTGAATTTCAATACCCTCCATGGTTTTCTTCTGAATCGAGGAGGTTGATTTCGAAAATCCTCGTGGCTGATCCAGAGAGACGGGCTTCAATCCCCGTGATAATGCGGGCCCCATGGTTTCTCAAAGGTTTCTCGGCGCCTTTCGTTTCAGACGATAAGGAGACAAAAAAATCAGAACCTGCAGATTCAAATTCAAATTCGAAAGCGAAAGCGAAGGCGAAACCGTCATCGCCCAAATTTTTCAATGCGTTCGAGTTCATTTCGTCGATGTCATCTGGGTTTGATTTATCTGGGTTATTCGAGAGCAAGAGGAAAACTGGGTCGATCTTCACATCGAGATGCTCGGCGACGGCGATTGTAACAAAGATCGAGGCTTTGGCGACGGGGTTGAGTTTCAAGGTTGGGAATGAAAAGGGTTTCAAGATGAGGCTACAAGGGCCGTCGGAGGGAAGGAAAGGGAAGCTGACGGTGACGGCGGAGGTGTTCGAGGTGGCGCCGGAGGTAGCCGTCGTGGAATTCTCAAAGAGTTCAGGTGATACCTTGGAATATGCTAAGTTTTGTGAGGAACAGATTAGGCCGGCGCTGAAAGATATAGTGTGGACGTGGCAAGGGGACAGTCCGGTCAACGGTGGCATCGACGGCCGTTACAGAGAAGAATCTCTGGAACACGGAATTAGTGACGTAGTGTAG 1371 0.4807 MEEDQKNTVFGKYEIGRLLGKGTFAKVYYGKEIATGESVAIKIVSKEQVRKEGMMEQIKREISVMRLVRHPNVVELKEVMATKTKIFFVMEYVRGGELFAKVARGKLKEEVARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENENLKISDFGLSALPEQLRQDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVILYALLAGFLPFQNENLMSMYSKVLKAEFQYPPWFSSESRRLISKILVADPERRASIPVIMRAPWFLKGFSAPFVSDDKETKKSEPADSNSNSKAKAKAKPSSPKFFNAFEFISSMSSGFDLSGLFESKRKTGSIFTSRCSATAIVTKIEALATGLSFKVGNEKGFKMRLQGPSEGRKGKLTVTAEVFEVAPEVAVVEFSKSSGDTLEYAKFCEEQIRPALKDIVWTWQGDSPVNGGIDGRYREESLEHGISDVV 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0776 456 FunFam Non-specific serine/threonine protein kinase 6 305 - -
Mibi05g0776 456 Pfam NAF domain 305 361 IPR004041 GO:0007165
Mibi05g0776 456 Gene3D Kinase associated domain 1, KA1 303 428 - -
Mibi05g0776 456 MobiDBLite consensus disorder prediction 278 301 - -
Mibi05g0776 456 CDD STKc_SnRK3 12 266 - -
Mibi05g0776 456 SMART serkin_6 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0776 456 Pfam Protein kinase domain 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0776 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Mibi05g0776 456 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 424 - -
Mibi05g0776 456 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
Mibi05g0776 456 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Mibi05g0776 456 ProSiteProfiles NAF domain profile. 303 328 IPR018451 GO:0007165
Mibi05g0776 456 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Mibi05g0776 456 Gene3D Transferase(Phosphotransferase) domain 1 93 272 - -
Mibi05g0776 456 FunFam Non-specific serine/threonine protein kinase 303 427 - -
Mibi05g0776 456 ProSiteProfiles Protein kinase domain profile. 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0776 456 SUPERFAMILY Protein kinase-like (PK-like) 9 275 IPR011009 -
Mibi05g0776 456 CDD CIPK_C 309 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0776 Mibi-ChrMibi05 7289555 7290925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0776 1 443 CBL-interacting serine-threonine protein kinases AT5G25110 69.333 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi05g0776 Pkinase 7e-75 CL0016