Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0773 ATGAGAAACTGCCACCGGAACGACGTCGTCGGACCCTTCATTCTCCATCGCCACCATCCTCCCACCAATGCAGCCGCCGGCGGCCACTTCCGCCTCTGGAATTCCCTCTCCGCCTCCTCTTTCCGCCGTCTCATTTTTGACGCCCTCATCTGCGGCGGCAGCTCCCGTTACTACTGTGACGATTTCAGCTCCACCACGACATCAACCTCCGGCAACTCGAAGGACAACCTCCGACAACATCGAAAAGGACAATCCAACCCCAAGTGTAACAACAATGCGAGGTCCGAAAAACTGTCGGATCTTCTGAATATAGCGAATTCAGAGAATCTTGTTGAAACCAAAAAGAAGGAAGAGATGCTGGAGGAGCTGAGGAAAGTTGTGCAGGAGTTGCAAGGAGATGACTTGACGAAGCGACACGTGGCGGCATCAAATATTAGATTGCTCGCCAAGGAAAACTTGGAAGTTAGAGGAATTTTTGCAATGCTTGGAGTCATTTCTCCTCTGGTTGGAATGCTTGACTTGGAAGACTCTAATTCTCAAATCGCTTCTCTTTATGCGTTGCTCAACCTCGGAATCGCCAACGATTCAAATAAGGCATCCATTGTCAAAGTTGGTGCTGTTCACAAGATGTTGAAGCTCATTGAATGTCCTACAGGTCTGGATTCATCAGTCTCTGAAGCGATTGTTGCAAATTTTCTCAGCTTGAGTGCTTTAGATTCAAACAAATCAATTATTGGGTCCTCTGGTGCAATACCTTTCCTGGTTAGGACCCTTAGAAACTTGGATAATAAATGTAGCCCTCAAGCTAAGCAAGATGCTCTGCGAGCACTGTATAATCTTTCAATCTTGCCAACCAATATCTCATTCATTTTGGAAACCGATTTGGCTCAACACCTGATAAATACAATAGGAGACATGGAGGTGAGTGAAAGAGTCCTTCCCATCTTGAGCAATCTGGCATCCACACCAGAGGGCCGAAAAGCTATCAGTTCTGTGCCAGAAGCATTCCCAATTCTGGTTGATGTATTAAACTGGGCAGATTCACCGGGATGCCAAGAGAAGGCGTCCTACATTTTGATGATTATGGCACACAAAGCTTATGGTGATAGGCAGGCCATGATTGAAGCTGGGATTGTATCATCATTGTTTGAGTTGACACTTTTGGGTACCCCATTGGCACAAAAAAGAGCCTCAAGGATATTGCAATGTCTTAGAGTAGTTAAAGGCAAGCAGGTTTCTGGGAGTTGCAGTGGGAACTTCCACGCAAATGTCTCTGCTCCTATGTGTGGTGGCTCTTCTTCTTCTTGTACAAAGCCACGTGGAGGTGGTAGAAGGTCTATGGAGGGAGAGGAAGATATGATGAGCGAGGAGAAGAAAGCTGTGAAGCAATTAGTAAGACAAAGTTTGCAGAATAACATGAGGAAAATTGTGAAGAGGGCTAACATCCCTCAGGATTTCGTCCCATCTGAACATTTTAAGTCACTCACTTCAAGTTCGACTTCAAAGAGCCTGCCGTTTTGA 1521 0.4602 MRNCHRNDVVGPFILHRHHPPTNAAAGGHFRLWNSLSASSFRRLIFDALICGGSSRYYCDDFSSTTTSTSGNSKDNLRQHRKGQSNPKCNNNARSEKLSDLLNIANSENLVETKKKEEMLEELRKVVQELQGDDLTKRHVAASNIRLLAKENLEVRGIFAMLGVISPLVGMLDLEDSNSQIASLYALLNLGIANDSNKASIVKVGAVHKMLKLIECPTGLDSSVSEAIVANFLSLSALDSNKSIIGSSGAIPFLVRTLRNLDNKCSPQAKQDALRALYNLSILPTNISFILETDLAQHLINTIGDMEVSERVLPILSNLASTPEGRKAISSVPEAFPILVDVLNWADSPGCQEKASYILMIMAHKAYGDRQAMIEAGIVSSLFELTLLGTPLAQKRASRILQCLRVVKGKQVSGSCSGNFHANVSAPMCGGSSSSCTKPRGGGRRSMEGEEDMMSEEKKAVKQLVRQSLQNNMRKIVKRANIPQDFVPSEHFKSLTSSSTSKSLPF 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0773 506 SUPERFAMILY ARM repeat 122 404 IPR016024 -
Mibi05g0773 506 Coils Coil 113 133 - -
Mibi05g0773 506 Gene3D - 263 416 IPR011989 -
Mibi05g0773 506 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 25 506 - -
Mibi05g0773 506 MobiDBLite consensus disorder prediction 431 457 - -
Mibi05g0773 506 SMART arm_5 152 192 IPR000225 GO:0005515
Mibi05g0773 506 SMART arm_5 194 237 IPR000225 GO:0005515
Mibi05g0773 506 SMART arm_5 283 321 IPR000225 GO:0005515
Mibi05g0773 506 SMART arm_5 238 282 IPR000225 GO:0005515
Mibi05g0773 506 MobiDBLite consensus disorder prediction 64 93 - -
Mibi05g0773 506 Gene3D - 95 262 IPR011989 -
Mibi05g0773 506 Coils Coil 447 467 - -
Mibi05g0773 506 MobiDBLite consensus disorder prediction 443 457 - -
Mibi05g0773 506 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 249 281 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0773 Mibi-ChrMibi05 7234133 7235838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0773 112 405 U-box Gene Family AT2G23140 33.446 2.48e-34 135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1902 08 35943120 35945020 Mibi05g0773 05 7234133 7235838 CCT