Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0768 ATGACAGTAGAGACCAGAATGGATGATCCCAGAGACCAGTTTCCCGTTGGAATGCGTGTTCTTGCTGTTGACGATGACCCAACTTGCCTCTTCGTCCTGGAAACTCTTCTTCGAAGATGCCAATATAACGTGACTACAACTAGTCAGGCAATAACAGCATTAAAATTGTTGAGAGAGAACAGAAACAAGTTTGACCTGGTCATCAGTGATGTTCATATGCCTGACATGGATGGATTTAAGCTACTCGAGCATGTAGGACTTGAGATGGACTTACCAGTCATTATGTTGTCTGCATATGGTGACACAAAGCTAGTGATGAAGGGAATTACTCATGGAGCATGCGATTATCTGTTGAAACCTGTTCGAATGGAAGAGCTAAAGAACATTTGGCAGCATGTGATTAGGAGGAAGAAGTTTGACTCTAAGGAGCAGAACAAACCCCAAAACCAAGACAAGCCTCACGCTGGTAGTGGCTGCAGTCTAGCACCAGCAGGAACAAGCAACATAGACCAAAAGATGACAAAGAAAAGGAAGGATCAGAGTGATGAAGATGAAGACCACGATGAAGACCCGTCAACCCAAAAGAAGCCTCGAGTTGTCTGGACAGTGGAGCTGCACCGAAAGTTTGTTGCTGCTGTTAATCAGTTAGGCATTGACAAGGCTGTACCTAAAAAGATTCTTGATTCGATGAATGTTGAAAAGCTTACTAGGGAGAATGTGGCTAGCCATCTCCAGAAATATAGGCTTTATCTGAAAAGAATCAGTTGTGTGGCGAACCAACAGGCTAGTCTGGTGGCAGCCTTAGGTACTGCGGATCAATCCTACTGGAGAATGGGTTCTTTGAGTGGCCTTAGCCATTTACAAACATTGAGTGCTCCTAGACAGTCTCAGAACAATGGTTTCAGATCCCTCCCTTCTAGTAGGGTGATTGGTAGGTTGAACACTCCTGCTGGCCTGGGTGTGCATGGACTGCCTTCTTCAAGAAATATTCAGTTTGGTTGTTCACAGAATTTCAACATTTCTATGAATGACCCACTCAAGTTCCAGTCAACCATTGTGCATGGTAACCGAAATGGCAACCCAGTTCCGGGAATAGCAGGGTATACTGAGCGTGATCAACTTCAACACCATAGGCATAAAAGCATTAGTTCTGCTCAAGACGTCACCAATGCTATTGATGATGAAATTATGTTACCCATCTCTAGCGAACCACTTGATCCAACATATTCACTTCCAAGTGTAAAAAACAACTCCTTTATGGTAGCAGCACGTCCTCAAAACACACAAGGGGGCAGAGCATATGAGAATTTATCTTCATTAGATTCTCAACCTTCAGAAATTCCTTGCTCTTTGCTGGATCATGGTGGTTGTGGTGATAATTGGTCTGATGGAGTGCACTCATCTAAAATCCTGCCAAGTTCTTATCCACCAACTGGGTTTCCTAAACAAGTGATTGTATCTCCAACAAAGAACTTGACTTCTACACCCTTGCGTGTTGGCAATCCAAGTGTTGCTTCATCCATCAATTTAATGTACAACCAATCCCATGATGTAACTGCAAATGGGAATTTCCAAGGAGACATTTTTGCTAAAACACCCGGGCACATAAGCGGTAATGTACCCTTTCAAGGATGGGATGACCGAAACCACGAGGCTTCTTACAGTTCAAAAGTTATTTGCAGCTCTCTAAACTCTCTGATTCCTGTTGATGGTACTGTTAGCCTATCAGCTAGTCCTTCTCTAGCAGACCCGGCTTTCTACAGAAGCTTGGACTTCAATTGTGGTAATCCCATGCAAATTAGGCATGATGGAGATACAAAACTAGCTGAAGAGATTCCATTGAAACATGGTCAAAGGTATATAATTGACCAGCAGCAGATGGCACAACAGAGTCGCATCTCTGACAATCTTGGTTCACTGGATGACTTAGTCGGTTCAATGATGAAACAGGATGAAGACAAGGTGAAATTATTGGAGGGAGAGCAAATGTGTAATAATTACACCGTGGGGACATCGATGTGA 2022 0.4337 MTVETRMDDPRDQFPVGMRVLAVDDDPTCLFVLETLLRRCQYNVTTTSQAITALKLLRENRNKFDLVISDVHMPDMDGFKLLEHVGLEMDLPVIMLSAYGDTKLVMKGITHGACDYLLKPVRMEELKNIWQHVIRRKKFDSKEQNKPQNQDKPHAGSGCSLAPAGTSNIDQKMTKKRKDQSDEDEDHDEDPSTQKKPRVVWTVELHRKFVAAVNQLGIDKAVPKKILDSMNVEKLTRENVASHLQKYRLYLKRISCVANQQASLVAALGTADQSYWRMGSLSGLSHLQTLSAPRQSQNNGFRSLPSSRVIGRLNTPAGLGVHGLPSSRNIQFGCSQNFNISMNDPLKFQSTIVHGNRNGNPVPGIAGYTERDQLQHHRHKSISSAQDVTNAIDDEIMLPISSEPLDPTYSLPSVKNNSFMVAARPQNTQGGRAYENLSSLDSQPSEIPCSLLDHGGCGDNWSDGVHSSKILPSSYPPTGFPKQVIVSPTKNLTSTPLRVGNPSVASSINLMYNQSHDVTANGNFQGDIFAKTPGHISGNVPFQGWDDRNHEASYSSKVICSSLNSLIPVDGTVSLSASPSLADPAFYRSLDFNCGNPMQIRHDGDTKLAEEIPLKHGQRYIIDQQQMAQQSRISDNLGSLDDLVGSMMKQDEDKVKLLEGEQMCNNYTVGTSM 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0768 673 Pfam Response regulator receiver domain 20 128 IPR001789 GO:0000160
Mibi05g0768 673 SMART REC_2 18 130 IPR001789 GO:0000160
Mibi05g0768 673 MobiDBLite consensus disorder prediction 138 197 - -
Mibi05g0768 673 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 196 249 IPR006447 GO:0003677
Mibi05g0768 673 PIRSF RR_ARR_type-B 1 671 IPR017053 GO:0003677|GO:0003700|GO:0009736
Mibi05g0768 673 MobiDBLite consensus disorder prediction 150 170 - -
Mibi05g0768 673 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 193 252 IPR017930 -
Mibi05g0768 673 SUPERFAMILY Homeodomain-like 193 253 IPR009057 -
Mibi05g0768 673 FunFam Two-component response regulator 192 255 - -
Mibi05g0768 673 Gene3D - 17 155 - -
Mibi05g0768 673 MobiDBLite consensus disorder prediction 171 197 - -
Mibi05g0768 673 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Mibi05g0768 673 CDD REC_typeB_ARR-like 20 134 - -
Mibi05g0768 673 Pfam Myb-like DNA-binding domain 198 248 IPR001005 -
Mibi05g0768 673 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 332 IPR045279 GO:0009736
Mibi05g0768 673 SUPERFAMILY CheY-like 17 142 IPR011006 -
Mibi05g0768 673 Gene3D - 192 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0768 Mibi-ChrMibi05 7174598 7178447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0768 1 661 Response Regulator Gene Family AT2G25180 42.774 3.06e-126 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mibi05g0768 Response_reg 1.2e-23 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1906 08 35992551 35995551 Mibi05g0768 05 7174598 7178447 CCT
Mibi05g0768 05 7174598 7178447 Mibi05g0768 05 7174598 7178447 ECH