Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0766 ATGGAACGAGTTTTTAGTAATCCCGCCGGCCTACTAACCCCCAGAGAGGTTCCTGCCAGTCCAAGTACTCCATTGCAGAGCCCACAGGAGAAGAAACACCTATCTGTTGAAGAGGAGAAAGAAGAAGAAGATGGTGTAAAGACAGAATCTTTGTTTGATCTGAACGTGAACGGCGATGATTCTGATATTGGGTGCGATCCAGAACTCCAATTCAGCACCAATTTGGATGTAGATATGGAGAAATGTAAAAGCTCAGAAAATTCTGGTCCTTTAGAGGCAGAGCCACGAGTGTTCTCTTGCAGGTACTGTCAGAGGAAGTTTTACAGTTCACAAGCGCTTGGAGGACACCAAAATGCACACAAGAGGGAGAGGTTGATAGCGAAAAGAGGACAGAGGGAGATATTAATGGCTTCAGCTACAGAATTTGGGCTTCCTTTTCTGCATCATTATAATCACAGGTTTACAAGTATGGCGTCTCTGCCTCTACATGGAGCTTCATGTAATAAACCTCTTGGAATTCAGGCACACTCCTTGATTCACAAGCCTTCTCATCATGTTTCTTCTAATTATGGGTTTGGAAATGGCCATGGACATCATGGATGGTCAAGACCACTTATTGATCAGAAACCCAGAATAGGGAAGTTAGAGATGGCTAATTTTCACAGAACAACAACATTAGGCTTGTCATCACGAGGCAGTGTGGGTAGGTTTGAAACGGTGAAGACTATGGTGGGTTCTGCAGTTAGTGAAGAAATCCCTGGATGTTTTGTAAGTGGAACTATATTGAAGAGTACTCATCAAGAAGAAACAAAGCACCTTGATTTGTCCCTCAGGCTCTAA 840 0.4345 MERVFSNPAGLLTPREVPASPSTPLQSPQEKKHLSVEEEKEEEDGVKTESLFDLNVNGDDSDIGCDPELQFSTNLDVDMEKCKSSENSGPLEAEPRVFSCRYCQRKFYSSQALGGHQNAHKRERLIAKRGQREILMASATEFGLPFLHHYNHRFTSMASLPLHGASCNKPLGIQAHSLIHKPSHHVSSNYGFGNGHGHHGWSRPLIDQKPRIGKLEMANFHRTTTLGLSSRGSVGRFETVKTMVGSAVSEEIPGCFVSGTILKSTHQEETKHLDLSLRL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0766 279 MobiDBLite consensus disorder prediction 31 47 - -
Mibi05g0766 279 ProSitePatterns Zinc finger C2H2 type domain signature. 100 120 IPR013087 -
Mibi05g0766 279 ProSiteProfiles Zinc finger C2H2 type domain profile. 98 125 IPR013087 -
Mibi05g0766 279 SUPERFAMILY beta-beta-alpha zinc fingers 95 125 IPR036236 -
Mibi05g0766 279 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 26 279 IPR044246 GO:0009788
Mibi05g0766 279 MobiDBLite consensus disorder prediction 1 47 - -
Mibi05g0766 279 Gene3D Classic Zinc Finger 73 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0766 Mibi-ChrMibi05 7159366 7160205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0766 37 279 C2H2 Transcription Factor Family AT5G10970 39.841 2.63e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi05g0766 None None None