Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0763 ATGGCAAGACCACAACAGAGATATCGAGGCGTCCGACAAAGGCATTGGGGATCGTGGGTGTCTGAAATTCGACACCCTCTATTGAAGACGAGGATATGGCTTGGTACATTTGAAACTGCCGAAGATGCAGCAAGAGCTTACGATGAAGCAGCTAGGCTTATGTGTGGTCAGAGAGCAAGAACAAACTTCCCTTACAACCCAAATGCATCTCAATCACCATCTTCCAAGCTTCTCTCTGCAACTCTCACTGCTAAACTTCATAGATGTTATATGGCTTCACTTCAAATGACCAGACCCACCGTACAGGAACCTCTGAAATTGACTTCACCAAATGTTGTGTCCACCACTAGCACAAGCAACTCGTCCTCTGTGAAAAGCAGAGAAACTGATGTTACAATGTTGAGAGGGAAGAAAGCAAAGGAGGAAGATGCTGAAGAATCAGAGGCAAAGTGGGGTGTGAAGAAGGAGAAGGTGGAAAGTGGTGAGCAATTCAAGCCTCTTGAAGAAGATCATATAGAGCAAATGATTGAGGAGCTTCTTGATTATGGGTCTATTGAGCTATGCTCTGCCATGCCACCTCAGTAA 585 0.453 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGQRARTNFPYNPNASQSPSSKLLSATLTAKLHRCYMASLQMTRPTVQEPLKLTSPNVVSTTSTSNSSSVKSRETDVTMLRGKKAKEEDAEESEAKWGVKKEKVESGEQFKPLEEDHIEQMIEELLDYGSIELCSAMPPQ 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0763 194 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Mibi05g0763 194 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Mibi05g0763 194 MobiDBLite consensus disorder prediction 110 164 - -
Mibi05g0763 194 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Mibi05g0763 194 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Mibi05g0763 194 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Mibi05g0763 194 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Mibi05g0763 194 MobiDBLite consensus disorder prediction 130 164 - -
Mibi05g0763 194 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Mibi05g0763 194 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Mibi05g0763 194 MobiDBLite consensus disorder prediction 110 129 - -
Mibi05g0763 194 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Mibi05g0763 194 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0763 Mibi-ChrMibi05 7122833 7123503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0763 1 194 AP2-EREBP Transcription Factor Family AT5G25190 64.948 5.79e-81 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi05g0763 AP2 1.1e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1913 08 36070806 36071439 Mibi05g0763 05 7122833 7123503 CCT
Mibi05g0763 05 7122833 7123503 Mibi05g0763 05 7122833 7123503 ECH