LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi05g0761	ATGAAAATGAAGCTTCTTTTGTTGCTTCCTTTTGTTCAAGGACCCATTTGGGTTTCTTTTGCTGCTGAAGCCCCCCTTTTGTCACCCACAGTCCCACTTGTGTCCCCAGCATCAATGGCACCATTTTCTCCAGATGTTCAGGCGGAGAATGAATCAAACTCAACAGATGTAGACATGAAAGTGGTGATATCTCTCATTGTGGCTGCAACTGCACTTGGTGCAGTCATTTTGTCTTGTTTATGCTTCTGTGTTTTTTACAAGAAGTATCCATCCAAATTCAACAGGAAAAATGTCCAAAGCTCAGATGTGGAGAAAGGGCTTGCGAGAACCCCATCTCTGAGAAAATTTAGTTCATTCAAGACGGATGCTAAGAAGGGGTCTATTTCAATATTTGATCATAAGACATTAGAAAAAGCGACGAGCAATTTTCTGGAAAGTAACATAGTTGGAGAGGGAGGGTTTGGATGCGTTTACAAGGCTCGATTACATCATAATTTTGTTGCCGTCAAGAAATTGCACTGTGAAAGTCAAGATGCTCTGAGAGAATTTCAGAATGAGGTGGACTTGTTAAGTAAAATTCATCATCCAAATGTAATCTCTTTGCTGGGTTATAGCAGTTATGGCGACACTAGGTTTATTGTCTATGAATTGATGCAAAATGGATCTTTGGAGACTCAATTACATGGACCATCTCATGGCTCGGCGTTGACTTGGCACATGAGGATGAAGATTGCCCTTGACACTGCAAGAGGATTAGAGTATATGCATGAAATCTGTAACCCCCCAGTGATCCATAGAGATCTGAAATCGTCTAATATTCTTTTAGACGCAAATTTCAATGCCAAGCTGTGTGATTTCGGTTTTGCCGTAGCTGATGGGTCCCAAGACAAGAGTGACATAAAACTCTCAGGCACATTGGGATATGTAGCTCCCGAGTATATACTAGATGGTAAATTGACTGATAAAAGCGATGTGTACGCATTCGGAGTTGTGCTTCTAGAACTTGTTTTGGGGAGGAAGCCAGTGGAAAAGCTAACAGCCACACAGTGCCAGTCTATAATCACATGGGCGGTACCACAGCTCAGCGACAGATCCAAGCTTCCCAACATTGTGGATCCCATGATCAAGAATACAATGGACCTTAAGCATTTGTACCAGGTTGCAGCCGTGGCGGTGCTTTGTGTGCAACCAGAACCGAGCTATCGTCCGCTGATTAAAGATGTTCTGCACTCTCTCATCCCTCTTGTTCCTGTGGAGCTTGGAGGAACACTCAGAGTTGCACAAGCATCACAGCCTCCTCCTTCAACACAATAA	1314	0.4323	MKMKLLLLLPFVQGPIWVSFAAEAPLLSPTVPLVSPASMAPFSPDVQAENESNSTDVDMKVVISLIVAATALGAVILSCLCFCVFYKKYPSKFNRKNVQSSDVEKGLARTPSLRKFSSFKTDAKKGSISIFDHKTLEKATSNFLESNIVGEGGFGCVYKARLHHNFVAVKKLHCESQDALREFQNEVDLLSKIHHPNVISLLGYSSYGDTRFIVYELMQNGSLETQLHGPSHGSALTWHMRMKIALDTARGLEYMHEICNPPVIHRDLKSSNILLDANFNAKLCDFGFAVADGSQDKSDIKLSGTLGYVAPEYILDGKLTDKSDVYAFGVVLLELVLGRKPVEKLTATQCQSIITWAVPQLSDRSKLPNIVDPMIKNTMDLKHLYQVAAVAVLCVQPEPSYRPLIKDVLHSLIPLVPVELGGTLRVAQASQPPPSTQ	437

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi05g0761	437	FunFam	Protein kinase superfamily protein	110	217	-	-
	Mibi05g0761	437	Pfam	Protein kinase domain	146	410	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi05g0761	437	Gene3D	Transferase(Phosphotransferase) domain 1	218	417	-	-
	Mibi05g0761	437	FunFam	probable receptor-like protein kinase At1g80640	218	417	-	-
	Mibi05g0761	437	ProSitePatterns	Protein kinases ATP-binding region signature.	149	171	IPR017441	GO:0005524
	Mibi05g0761	437	ProSiteProfiles	Protein kinase domain profile.	143	413	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi05g0761	437	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	263	275	IPR008271	GO:0004672\|GO:0006468
	Mibi05g0761	437	SMART	serkin_6	143	413	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mibi05g0761	437	CDD	STKc_IRAK	149	415	-	-
	Mibi05g0761	437	SUPERFAMILY	Protein kinase-like (PK-like)	125	412	IPR011009	-
	Mibi05g0761	437	PANTHER	OS01G0750732 PROTEIN	38	415	-	-
	Mibi05g0761	437	Gene3D	Phosphorylase Kinase; domain 1	127	217	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi05g0761	Mibi-ChrMibi05	7101952	7104881	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi05g0761	61	416	Receptor kinase-like Gene Family	AT3G58690	43.251	7.74e-95	289

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-X	Mibi05g0761		Pkinase	5.6e-47	CL0016