Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0753 ATGAAAGGGTTTGAATCTCCCCTTCTAACTCTTACCTTTACTAGTGATTGTTTCACTGTCTACTTAACGATCATCTTGTTTGCTTTACAGACCGAGAAGGCCTTCTTGAAGCAACCTAAAGTGTTTCTCTCTTCGAAGAAGTCGGGAAAGGGCAAGAGGCCTGGGAAAGGAGGGAACAGATTCTGGAAAAGCATTGGGTTGGGTTTCAAGACTCCCAGAGAAGCCATTGAAGGGACTTACATTGATAAAAAATGCCCATTCACTGGTAATGTTTCCATCCGGGGCCGCATTCTTGCTGGTACCTGCCATAGTGCCAAGATGAACAGGACTATCATTGTGCGCCGCAACTACCTTCATTTTGTGAAAAAATACCAAAGGTATGAAAAAAGACACTCAAACATTGCAGCACATATATCACCATGTTTCCGTGTGAAGGAGGGTGATCATGTTACCGTTGGGCAATGCAGGCCTCTTTCAAAGACTGTAAGGTTCAATGTGCTGAAAGTGATTCCAGCTGGGTCTTCTGGAGGTGTGAAGAAAGCTTTTACTGGAGCTTAA 558 0.4409 MKGFESPLLTLTFTSDCFTVYLTIILFALQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIAAHISPCFRVKEGDHVTVGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFTGA 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0753 185 Gene3D - 18 184 - -
Mibi05g0753 185 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 36 175 IPR000266 GO:0003735|GO:0005840|GO:0006412
Mibi05g0753 185 Pfam Ribosomal_S17 N-terminal 30 98 IPR032440 -
Mibi05g0753 185 SUPERFAMILY Nucleic acid-binding proteins 94 173 IPR012340 -
Mibi05g0753 185 Pfam Ribosomal protein S17 100 168 IPR000266 GO:0003735|GO:0005840|GO:0006412
Mibi05g0753 185 TIGRFAM uS17_arch: ribosomal protein uS17 80 169 IPR028333 -
Mibi05g0753 185 ProSitePatterns Ribosomal protein S17 signature. 147 159 IPR019979 GO:0003735|GO:0005840|GO:0006412
Mibi05g0753 185 FunFam 40S ribosomal protein S11 27 184 - -
Mibi05g0753 185 PRINTS Ribosomal protein S17 family signature 157 164 IPR000266 GO:0003735|GO:0005840|GO:0006412
Mibi05g0753 185 PRINTS Ribosomal protein S17 family signature 114 137 IPR000266 GO:0003735|GO:0005840|GO:0006412
Mibi05g0753 185 PRINTS Ribosomal protein S17 family signature 147 157 IPR000266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0753 Mibi-ChrMibi05 7050980 7052677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0753 27 184 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 89.241 9.69e-94 268