Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0749 ATGTTAGAGCGTAAATATATACGCGCCATAATGGGAAGTAGATTTCTCCAATTTCATCGCCCATCGTTAACTTCTGCTAAAGCTCAGAAATATTCTCCTTCCCATTATTCCTCTGCAACCTCCACCCCTCTCTGTCTCTCCTTTCTCCTCTCTCGATTCCCATTCGAGAGGGAGCATCATTACCTTCATCCTCATTCCAATCAGCTTCAAAGGTTTCTTCCTATATTTTTCTTGGACTGCACGGTAAAGTTTGATCTTGAAGGTATATATATTAATATTACAACTGACATGGGGAAGCACAAGCATGCAAATGCAAACGGCAAGACATCCAAAGCTATTTTTGATGAAGACACAGCCATGTTCATCAACATGTCTCATGAGCTCAAGGAAGAAGGTAACAAACTCTCTCAAAGGCAGGATTTCGAAGGAGCTATAGTCAAGTATGAGAAGGCCCTCAACCTCCTTCCGAAAAACCACATAGAAATTGCTCTCCTCAGAAACCATATGGCTTTGTGTTATATGCATTTGGGTATTGGGGAATACCCCAAAGCAATCCATGAATGTAACTTAGCGCTAGAAGTATCACCCAGATACAGCAAAGCATTGTTGAGAAGAGCAAAGTGCTATGAAGAATTGAACCGTTTGGATTTGGCTCTGAGAGATGTGTATAATGTTCTCAGTTGGGAACCCAATAACTTTACTGCATTGGAGATCTTGGAGAGTTTGAAGAAGATAATGGAGGAGAAGGGCATCGCTTTTGATGAACAAAAGATTGGTCTGCCAAGTCCTGGTGCTCGCATGCGCCATGCGGTCAGAGAGAAACTGAAGAAAAAGAAAAGCAAAAAGAGAGAGACAGACAAGGCAGAAGATAAGGTTGTTGTTGAGGAGAATCTGAATGCTGCAAATACTGAAGAAGTAGTGACAAAAACAATTGATAAGGAAAAACTTATTGAGGAATCTGTTAAGGAAGAAACAAAGGTAACAAGGATGGCCAAGTTGGTATACGGAGAGGATATAAGGTGGGCACATTTGCCTAGGAATTGCAGTCTGAAATTGGTCAGGGATATTATTAAGGATCGCTTCCCTAGCTTGAAAGGCTTTCTTGTGAAATATAAAGATCAAGATGGTGACTTGGTCACAATCACTACCACCGAGGAACTAAGGTTTGCTGAATCTTCAAGCGTGCTGGGCTCAATTCGGCTCCATATAACAGAAGTTGATCCAAGCCAGGAACCATCTTATGAAGAAATAGACAGTGAAAATCAGGCGCAAACAGATGATGCTATCAATCAAAATGGTCCTAAGGAAGAAAGCAGAGATATTGCAACAAAAAGGCCAACCACCGTGGAGGACTGGATCGTTCATTTTGCAAGGATGTTTAAGAACCATGTTGGGTTTGATTCTGATGGATATTTAGATCTTCATGAGGTAGGAATGACTCTGTACACAGAAGCAATGGAGGATACCATAACAAGTAATGAAGCTCAAGAAGTTTTTGACATTTCTATAGATAAATTTCAAGAGATGGCAGCTTTAGCAATGTTTAACTGGGGGAATGTTCACATGTCCAAGGCGAGGAAGCGTCCTTCCATTTCAGATGATGAATCTTCTTTCGATAATGTTAAAGCTGCATATGAGTGGGCACAGGAGCAGTACAAGCTAGCAGAAGAGAGATATGAAGAATCTGTGAAAATCAAACCAGATTTCTTTGAAGGCTATCTTGCTCTTGGGCATCAACAATTTGAACAAGCAAAGCTGTGCTGGTCCTACGCAATTGCAAGCGAGAAGGATCTAGAATCAGAGGCTTCTGATGAGGTTTTACAAATATATAATAAGGCAGAGGACAGCATGGAGAAGGGCATGTTGATGTGGGAGGAGATGGAGGAACAACGCTTGCATGGAATGTCCAAAACAGAAAAATATAAAGCCCAATTGGAGAAAGTGGGTATGGATGGCATTTTCAAGGATGTTTCTTTTGATGAAGCTACAAAACATGCTGAGAATATGAGAACACAGATAAATCTTTTATGGGGTACTTTATTGTATGAACGGTCTGTTGTAGAATATAAGTTAGGCCTACCAACATGGGAGGAATGTTTGGAGATTTCAGTTGAAAAGTTTGAACTTGCTGGAGCTTCTCAAACTGATATAGCTGTCATGATAAAAAATCACTGTTCTAATGTAACAGAACTACAAGGTTGGGGGTTCAAAATTGATGAGTTAGTACAGGCGTGGAATGAGATGTACGATGCTCAGAGGTGGCATTGTGGAGTTCCATCGTTTCGACTTGAGCCATTGTTTCGTCGACGAGCCCCGAAACTTCATTACTTGTTGGAGCAGATAGGGAAGGCAAGTGAAGTATCCTACTCTTTCTCAAAGAGTCCAAGCTTAGCACTTTCTCTTTCTGGGAGTGAGACTTTGGAGAGGGTCTCAATTATTACTAATTAG 2448 0.4105 MLERKYIRAIMGSRFLQFHRPSLTSAKAQKYSPSHYSSATSTPLCLSFLLSRFPFEREHHYLHPHSNQLQRFLPIFFLDCTVKFDLEGIYINITTDMGKHKHANANGKTSKAIFDEDTAMFINMSHELKEEGNKLSQRQDFEGAIVKYEKALNLLPKNHIEIALLRNHMALCYMHLGIGEYPKAIHECNLALEVSPRYSKALLRRAKCYEELNRLDLALRDVYNVLSWEPNNFTALEILESLKKIMEEKGIAFDEQKIGLPSPGARMRHAVREKLKKKKSKKRETDKAEDKVVVEENLNAANTEEVVTKTIDKEKLIEESVKEETKVTRMAKLVYGEDIRWAHLPRNCSLKLVRDIIKDRFPSLKGFLVKYKDQDGDLVTITTTEELRFAESSSVLGSIRLHITEVDPSQEPSYEEIDSENQAQTDDAINQNGPKEESRDIATKRPTTVEDWIVHFARMFKNHVGFDSDGYLDLHEVGMTLYTEAMEDTITSNEAQEVFDISIDKFQEMAALAMFNWGNVHMSKARKRPSISDDESSFDNVKAAYEWAQEQYKLAEERYEESVKIKPDFFEGYLALGHQQFEQAKLCWSYAIASEKDLESEASDEVLQIYNKAEDSMEKGMLMWEEMEEQRLHGMSKTEKYKAQLEKVGMDGIFKDVSFDEATKHAENMRTQINLLWGTLLYERSVVEYKLGLPTWEECLEISVEKFELAGASQTDIAVMIKNHCSNVTELQGWGFKIDELVQAWNEMYDAQRWHCGVPSFRLEPLFRRRAPKLHYLLEQIGKASEVSYSFSKSPSLALSLSGSETLERVSIITN 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0749 815 SUPERFAMILY CAD & PB1 domains 331 416 - -
Mibi05g0749 815 SUPERFAMILY TPR-like 492 584 IPR011990 GO:0005515
Mibi05g0749 815 Coils Coil 271 291 - -
Mibi05g0749 815 PANTHER PROTEIN CLMP1 101 779 IPR044517 -
Mibi05g0749 815 Gene3D Tetratricopeptide repeat domain 491 651 IPR011990 GO:0005515
Mibi05g0749 815 ProSiteProfiles TPR repeat profile. 125 158 IPR019734 GO:0005515
Mibi05g0749 815 SMART PB1_new 328 406 IPR000270 GO:0005515
Mibi05g0749 815 ProSiteProfiles PB1 domain profile. 328 406 IPR000270 GO:0005515
Mibi05g0749 815 MobiDBLite consensus disorder prediction 415 431 - -
Mibi05g0749 815 MobiDBLite consensus disorder prediction 407 440 - -
Mibi05g0749 815 SMART tpr_5 199 232 IPR019734 GO:0005515
Mibi05g0749 815 SMART tpr_5 163 198 IPR019734 GO:0005515
Mibi05g0749 815 SMART tpr_5 536 569 IPR019734 GO:0005515
Mibi05g0749 815 SMART tpr_5 125 158 IPR019734 GO:0005515
Mibi05g0749 815 Gene3D - 319 406 - -
Mibi05g0749 815 Coils Coil 538 558 - -
Mibi05g0749 815 Gene3D Tetratricopeptide repeat domain 122 250 IPR011990 GO:0005515
Mibi05g0749 815 SUPERFAMILY TPR-like 115 247 IPR011990 GO:0005515
Mibi05g0749 815 CDD PB1 336 403 - -
Mibi05g0749 815 Pfam PB1 domain 329 404 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0749 Mibi-ChrMibi05 7025388 7029979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0749 114 232 Calmodulin-binding Proteins AT3G25230 32.061 1.06e-06 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1923 08 36201262 36203486 Mibi05g0749 05 7025388 7029979 CCT