Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0747 ATGGGTACTCTTCTGAAATGCTACAGACCTTTCTTCTTGTTGCTTCCCTATCCGGCGGCTCGAACGATTCAAATCAGAACCAACCATTTTAGCCCCACCGGCAGCATTTTCAGGAGGAAGAAGCTCAGTTCGCTTACTCGTTGCTTTAGTTCCACTTCTTTGCGGTCGTCCCAGCCGTCGATTACCGAACAGAGCTTCGGGAAATCCGACGGTGATGGGGTTAGGAATCCGTCGCCGGAGCTGTGGCTTTATAACACGATGAGTAAAGAGAGAGAGCTTTTCAAACCTAAAGTGGAAGGAAAAGTTGGAATGTATGTCTGCGGAGTCACTGCATATGATCTTAGCCATATTGGACATGCTCGCGTCTACGTCAATTTTGATGTTCTTTACAGATTTCTTAAGCACATGGATTTTGAAGTCTCTTATGTTCGTAATTTTACTGACGTAGATGACAAGATAATTGCTAGAGCAAATGAGTTAGGAGAGGATCCAATCAGCTTGAGTCGACGCTATTGTGAAGAGTTTAATCAAGACATGGCAACTCTTCATTGTCTACCACCTTCCGTGGAGCCACGAGTCTCAGAGCACATGCCTCAAATAATTAATATGGTTGAGCAGATTATTAATAATGGGTATGCCTACGTTGTTGATGGGGATGTGTACTTTGACGTTGAAAAATTTCCAGAATATGGGAAGCTATCTGGACGAGATCTTCAAGATAATCGAGCTGGCGAGAGGGTTGCTGTTGATTCAAGGAAGAAAAATCCTGCTGATTTTGCTCTATGGAAGTCTGCAAAGCCAGGAGAGCCATTTTGGGGGAGTCCCTGGGGTACTGGAAGACCTGGGTGGCATATTGAATGCAGTGCTATGAGCGCAGCTCATCTTGGTTACTCTTTTGATATCCACGGTGGAGGGATCGACCTTGTGTTTCCTCACCATGAAAATGAAATTGCTCAGAGTTGTGCTGCATGTAAGAAAAGTAATATAAGTCTCTGGATGCACAATGGTTTTGTCACTGTGGACTCACAGAAGATGTCCAAGTCTCTGGGGAATTTTTTCACCATACGGCAGGTTGTAGATGTCTACCATCCACTGGCTTTGAGATATTTTTTGATGGGAGCCCATTATCGATCTCCTATTAACTACTCTCATGTCCAGCTTGAAAGTGCGTCAGACCGTGTTTTCTACATATATGAGACCCTACATGAATGCGAAAGCTTTCTGTGCCAGCATGATCTCACAGATAGGAAGGATTCCGTCCCACCTGATACTCTAGATATTATTAACAAGTTTCATGATATTTTTGTGGCTTCAATGTCCGATGACCTCCACACCCCAGTTGTATTAGCTGCACTGTCTGACCCATTAAAAGCAATCAATGATCTGCTACATACCCGTCAGGGGAGGAAACGTGAATTGCGAATCGAATCACTTTCAGCTCTGGAGAAGAGTATCAGGAACGTTCTGACTGTTTTAGGACTTATGCCTGCTAGTTATTCTGAGGTTTTGCAGCAGCTTAAAGAAAAGGCTTTAAAGCGTGCAAACTTGACTGAAGAAGAAGTCTTACAGAAAATTACAGAACGGGCTGCTGCTAGAATTAACAAGGAGTACGAAAAATCAGATGCAATTAGGAATGATTTGGCAGTTTTAGGTATTGCTCTTAAGGACAGTCCGGATGGTACAACGTGGAGGCCCACCATTCCTCTTTCACTTCAAGAGCAGGAGACTACTGCACCTTGA 1740 0.4391 MGTLLKCYRPFFLLLPYPAARTIQIRTNHFSPTGSIFRRKKLSSLTRCFSSTSLRSSQPSITEQSFGKSDGDGVRNPSPELWLYNTMSKERELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVNFDVLYRFLKHMDFEVSYVRNFTDVDDKIIARANELGEDPISLSRRYCEEFNQDMATLHCLPPSVEPRVSEHMPQIINMVEQIINNGYAYVVDGDVYFDVEKFPEYGKLSGRDLQDNRAGERVAVDSRKKNPADFALWKSAKPGEPFWGSPWGTGRPGWHIECSAMSAAHLGYSFDIHGGGIDLVFPHHENEIAQSCAACKKSNISLWMHNGFVTVDSQKMSKSLGNFFTIRQVVDVYHPLALRYFLMGAHYRSPINYSHVQLESASDRVFYIYETLHECESFLCQHDLTDRKDSVPPDTLDIINKFHDIFVASMSDDLHTPVVLAALSDPLKAINDLLHTRQGRKRELRIESLSALEKSIRNVLTVLGLMPASYSEVLQQLKEKALKRANLTEEEVLQKITERAAARINKEYEKSDAIRNDLAVLGIALKDSPDGTTWRPTIPLSLQEQETTAP 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0747 579 Pfam DALR domain 435 495 IPR015273 GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423
Mibi05g0747 579 Hamap Cysteine--tRNA ligase [cysS]. 81 566 IPR015803 GO:0004817|GO:0005524|GO:0006423
Mibi05g0747 579 FunFam Cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial 383 565 - -
Mibi05g0747 579 Coils Coil 499 520 - -
Mibi05g0747 579 SMART dalr_2_4 434 503 IPR015273 GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423
Mibi05g0747 579 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 421 565 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Mibi05g0747 579 Gene3D HUPs 63 383 IPR014729 -
Mibi05g0747 579 PRINTS Cysteinyl-tRNA synthetase signature 269 287 IPR024909 -
Mibi05g0747 579 PRINTS Cysteinyl-tRNA synthetase signature 300 321 IPR024909 -
Mibi05g0747 579 PRINTS Cysteinyl-tRNA synthetase signature 104 115 IPR024909 -
Mibi05g0747 579 PRINTS Cysteinyl-tRNA synthetase signature 140 149 IPR024909 -
Mibi05g0747 579 PANTHER CYSTEINYL-TRNA SYNTHETASE 75 574 IPR024909 -
Mibi05g0747 579 TIGRFAM cysS: cysteine--tRNA ligase 81 564 IPR015803 GO:0004817|GO:0005524|GO:0006423
Mibi05g0747 579 Gene3D - 384 565 - -
Mibi05g0747 579 SUPERFAMILY Nucleotidylyl transferase 80 390 - -
Mibi05g0747 579 CDD CysRS_core 82 383 IPR032678 -
Mibi05g0747 579 Pfam tRNA synthetases class I (C) catalytic domain 94 390 IPR032678 -
Mibi05g0747 579 FunFam Cysteine--tRNA ligase 80 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0747 Mibi-ChrMibi05 7017887 7021371 Dispersed