Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0723 ATGACGCATTTGCTGCACGGGACGCTTCATGTGATCATATATGAAGTCGATAAGATTCATTCTGGACTCAACTTGATCAATCCCAACAACCAGGTGCCTTCATCAAAAACAAAACATGTCATTCTTGGTGGAAAAAACTTTGGGAGGAAAGTTCTTACCCGAGTCAAGAGTGTCCTGCGATCCAAGCCTCAGATAGCTGGGACGAAAATGTATGCAACTGTTGATTTAGATAAAGCAAGAGTTGGGAGAACAAGAATGATACGCCAAGCCTCAAAACCCAAATGGAATGAGGCATTTCATATATATTGTGCTCATTCTATTTCTAAGATCATATTCACTCTCAAATATGATAATCCAATTGGAGCAACTCTAATTGGAAGAGCTCATGTAGCTGCTGAACAAGTCCTAAGGGGCAACATAGTGGATACTTGGGTTGCTATATTGGATGAGAATCGTCGTTCCATACAAGGTGGCTCTAAAATCCATGTCAGAATGCAGTTCTTTGATGTTACTAAGGATGTAACTTGGTCTCAAGGGATCAAAAGTCCGAGATATGCCGGTGTTCCTCGTACGTTCTTTACTCAAAAAGTTGGCTGCAACGTTACTTTGTACCAAGATGCCCATGTTCCAAGTGCTTATCTTCCTAGGATTCCTTTGTCTGATGGAAGATACTATGTGCCTAATAGATGTTGGGAGGATATTTTCAAAGCAATTACAAATGCTAAGCACTTGATTTACATTACTGGTTGGTCTGTGTATACTGAAATAACATTGGTAAGGGACATAATGAGGCCAATTTCTGGTGGGAACATGACACTTGGGGAGCTTCTGAAGAAGAAAGCTGATGAAGGTGTTAATGTTCTTATGCTTGTGTGGGATGATAGGACTTCTGTTGAAGACCTTAAGAAAGATGGGCTGATGGCAACCCATGATCAAGAAACAGAAGATTATTTTAGGAACACAAGAGTGAAGTGTGTGTTGTGTCCGCGTAATCCGGATGATGGACGTAGCATAATCCAAGGTTTTGAGATTTCAACAATGTTCACTCATCATCAAAAGACAGTGATCGTTGACAGTGAGGTTCCTGGTGGAGGAGGATCTCAGTGGCGAAGGATAGTGAGTTTCATCGGTGGTATTGATCTGTGTGATGGGAGATACGACACGCAAGAACATCCTTTGTTTTCAACTCTAAACACAACCCATAAAGATGATTTCCATCAGCCAAACTTCCCGGGAGCTTCAATCAAGAAAGGAGGTCCAAGAGAGCCATGGCATGATATTCACTGCAAACTAGAAGGGCCAGTGGCTTGGGATGTCTTGTCCAACTTCCAACAAAGGTGGGAGAAACAAGTTGGGAAGCAATTCTTACTCCCTCAGAGACTTCTTGATCAGATTCTATTACCTGAATCTTATACAGAAGCATCAAATGATAGAAATTCATGGACTGTTCAACTATTCAGATCCATTGATGGTGGTGCAGCTTCTGGCTTCCCTCAAGACCCATTAAAAGCATCTGACTTGGGCCTTGTTAGTGGGAAAGATAACATCATTGATAGAAGTATTCAGGATGCTTACATAAATGCTATTAGGCGAGCCAAGAACTTTGTCTACATCGAAAACCAGTATTTTCTGGGGAGTTCTTATGGTTGGAAAGGGTCTGACATAAAAGTTGAGGATATCGGGGCTTTGCATCTTATACCAAAGGAGCTATCACTGAAGATTGTGAGCAAGATTGAAGCAGGAGAAAGGTTTTCAGTGTACATTGTGATCCCAATGTGGCCAGAAGGTATCCCTGATAGTGGTTCGGTTCAAGCAATATTGGATTGGCAAAGAAGAACAATGGAGATGATGTATACTGATATTGCTGCAGCCATTCAGAGAAAAAGAATCACAGCCCATCCTAGAGATTACTTGACATTTTTCTGCCTGGGAAATAGAGAGAGTAAGAAACCTGGAGAATATGTTCCTCCAGAGAGACCAGATCCTGACAGTGATTATAGCAGAGCACAAGAGGCCAGGCGCTTCATGATCTATGTTCATGCCAAGATGATGATAGTTGACGATGAATACATAATCATTGGTTCTGCTAACATAAACCAGAGATCAATGGATGGTGCAAGGGACAGTGAGATTGCAATGGGTGCATTCCAACCATATCACCTTGCATCGTTTGGCCCACCAAAAGGTCAGATATATGGTTTTAGAAGAGCTTTATGGTACGAACATCTTGGGAAACCTAAAGGTGATGAAGCCTTTGACCATCCAGAAAGTGAAAATTGTGTGAAGCTTGTGAATTATCTTTCAGACTTGAACTGGGAAAAATATTCAAATCAAACATTTGATCAACAAAGCTCATTATTCAACCACCTCATGCGTTACCCTATAGATATAACCAAAGATGGGAATGTAACTCAATTACAAGAGTTTGAATTCTTTCCTGACACCAAGGCTTATGTTTTGGGCTCCAAATCAAGCCTTCCTCCAATTCTTACCACATAG 2499 0.4126 MTHLLHGTLHVIIYEVDKIHSGLNLINPNNQVPSSKTKHVILGGKNFGRKVLTRVKSVLRSKPQIAGTKMYATVDLDKARVGRTRMIRQASKPKWNEAFHIYCAHSISKIIFTLKYDNPIGATLIGRAHVAAEQVLRGNIVDTWVAILDENRRSIQGGSKIHVRMQFFDVTKDVTWSQGIKSPRYAGVPRTFFTQKVGCNVTLYQDAHVPSAYLPRIPLSDGRYYVPNRCWEDIFKAITNAKHLIYITGWSVYTEITLVRDIMRPISGGNMTLGELLKKKADEGVNVLMLVWDDRTSVEDLKKDGLMATHDQETEDYFRNTRVKCVLCPRNPDDGRSIIQGFEISTMFTHHQKTVIVDSEVPGGGGSQWRRIVSFIGGIDLCDGRYDTQEHPLFSTLNTTHKDDFHQPNFPGASIKKGGPREPWHDIHCKLEGPVAWDVLSNFQQRWEKQVGKQFLLPQRLLDQILLPESYTEASNDRNSWTVQLFRSIDGGAASGFPQDPLKASDLGLVSGKDNIIDRSIQDAYINAIRRAKNFVYIENQYFLGSSYGWKGSDIKVEDIGALHLIPKELSLKIVSKIEAGERFSVYIVIPMWPEGIPDSGSVQAILDWQRRTMEMMYTDIAAAIQRKRITAHPRDYLTFFCLGNRESKKPGEYVPPERPDPDSDYSRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAFQPYHLASFGPPKGQIYGFRRALWYEHLGKPKGDEAFDHPESENCVKLVNYLSDLNWEKYSNQTFDQQSSLFNHLMRYPIDITKDGNVTQLQEFEFFPDTKAYVLGSKSSLPPILTT 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0723 832 Pfam Phospholipase D C terminal 749 823 IPR024632 -
Mibi05g0723 832 Gene3D Endonuclease Chain A 502 716 - -
Mibi05g0723 832 SMART pld_4 346 385 IPR001736 GO:0003824
Mibi05g0723 832 SMART pld_4 675 702 IPR001736 GO:0003824
Mibi05g0723 832 Gene3D C2 domain 51 178 IPR035892 -
Mibi05g0723 832 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 346 385 IPR001736 GO:0003824
Mibi05g0723 832 PANTHER PHOSPHOLIPASE D 4 821 IPR015679 -
Mibi05g0723 832 SUPERFAMILY Phospholipase D/nuclease 171 457 - -
Mibi05g0723 832 Gene3D Endonuclease Chain A 221 474 - -
Mibi05g0723 832 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 67 170 IPR035892 -
Mibi05g0723 832 FunFam Phospholipase D 488 721 - -
Mibi05g0723 832 Pfam C2 domain 62 146 IPR000008 -
Mibi05g0723 832 CDD C2_plant_PLD 4 168 - -
Mibi05g0723 832 Pfam Phospholipase D Active site motif 346 385 IPR001736 GO:0003824
Mibi05g0723 832 Pfam Phospholipase D Active site motif 676 702 IPR001736 GO:0003824
Mibi05g0723 832 ProSiteProfiles C2 domain profile. 1 145 IPR000008 -
Mibi05g0723 832 PIRSF PLD_plant 1 832 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mibi05g0723 832 FunFam Phospholipase D delta 221 464 - -
Mibi05g0723 832 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 675 702 IPR001736 GO:0003824
Mibi05g0723 832 SUPERFAMILY Phospholipase D/nuclease 521 747 - -
Mibi05g0723 832 SMART C2_3c 8 144 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0723 Mibi-ChrMibi05 6832748 6836519 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0723 3 832 Phospholipase D Gene Family (Wang group) AT3G15730 64.784 0.0 1116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0723 05 6832748 6836519 Mibi04g0804 04 16529304 16533591 ECH
Mibi05g0723 05 6832748 6836519 Mibi11g1148 11 28663815 28667092 ECH
Mibi05g0723 05 6832748 6836519 Mibi05g0723 05 6832748 6836519 ECH