Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0722 ATGGCTAGTTTGTTACACGGGACGCTTTGTGTAACCATAGTTGACGTTGATAAGCTGCACAATAGATGTAACTTGGATTTTTGCAACAAGGATACACCCCACCGAGGGAAGAGATTTCTAGCCCAAGTCAAGGGCTGTTTGCTGTGTCGACCAGAGCTTGTTGGGACTAGACTGTATGCAACAGTTGATTTAGATAAAGCCAGAGTTGCAAGAACCAGAATGATACGACATCAAACGACCAATCCCAAGTGGAATGAGACATTTCACATATATTGTGCCCACAAGGTTTCTAACATTATTTTCACAGTCAAAGATGGAAATCCCATTGGAGCAACACTAATTGGAAGAGCATCTGTCCCTGTAGATCAAGTTCTTACTGGGGCCCCACTAAACAGACAAGTTGAGATTTATGATGATGACCTTCATCGTCCTGTAAAAGGCGGCTCTAAAATACATGTCAAAATAGAATTCAATCATGCGGTCAATGATCCATACTGGTCCAGAGGAATAAAGAGTCCAGATTTTCCTGGAGTTCCTCATGTGTTCTTCAACCAGAGAAAAGATTGCAAAGTTACTTTGTACCAAGATGCTCATGTCCTTAATAATTTTAAGGTATCTATCCCACTGTCCGGGGTAAACAGTGATTATACTCCAGGAAGATGTTGGGAGGATATTTTCAGTGCAATTTATAATGCAAAGTACCTTATTTACATAACTGGTTGGTCCATATACACTGAAATAACCTTAACTAGGAACTCAGATAAGCCGTCCATCACTCTGGGAGAATTGCTCTTGAAGAAAGCAGATGAAGGAGTGAAAGTTTTTATGCTTGTTTGGGATGACAGAACTTCTGATGAACTAAGAAAAGAAGGGTTGATGGCAACACATGATCAAGAAACAGCCCAGTACTTCAGGTATAGTAAAGTAAAATGTGTCTTATGCCCCAGAAATCCTGATGTTGGAAAGAGCATAATCCAAGGGCTTCAAACTTCAACCATGTTCACCCACCACCAAAAGGCAGTAGTTGCTGACTGTGACTTGGACATTACTGGAGGATCACAAAAGAGGACTATTGTGAGTTTCATAGGTGGGATTGATTTGTGTGACGGGCGATATGATACGCATGAGCATCCGTTGTTCTCGACTCTAAACACGATCCATAAAAATGATTTCCATCAGCCAAATTTTCCAGGAGCTTCAATTAAGAAAGGTGGTCCAAGAGAGCCATGGCATGATATTCATTGCAAGCTAGAAGGGCCTATTGCTTGGGATGTATTGTACAATTTTGAGCAAAGGTGGGAGAAACAAGTTGAGAAGATTTTCCTTATACCTCTCACGGAGCATGATGAGATTCTTGTCTCTCCATCTGAGGTAAAACGATCAGTAGACCATGAGACATGGACTGTTCAGTTGTTCAGGTCCATTGATGGTGGTGCCGTTTCTGGGTTTCCTACAGACCAAGATGATGCAGCCGAATGGGGCCTTGTCAGTGGAAAAAACAACGTCATCGATAGAAGCATTCAGGATGCTTACATAAATGCTATACGGAGAGCCAAGAACTTCATTTATATCGAAAACCAGTATTTCCTAGGGAGCTCATATGGATGGAAAGCAACTGATATAAAAGTTGAAGCTATTGGGGCTCTTCATCTAATACCAAAGGAGCTATCACTAAAGATTGTGAGCAAGATAAAAGAAAGACAGAGATTTGTTGCGTACATTGTGATCCCAATGTGGCCAGAAGGCGATCCTGAGAGTGCTTCAGTTCAAGCAATATTAGATTGGCAAAGAAGGACAATGGAGATGATGTATACTGATATAGCTGAAGCCATTGAAGAAGTAGGATCTAAAGCAGACCCCACAGATTATCTCACTTTTTTCTGCCTTGGGAATAGAGAGGTAGAGAAACCTGGAGAATATGTTCCTCCAGAGAGACCAACTCCTGATACTAACTATGATAAAGCACAAAAAGCTAGGCGCTTCATGATCTATGTTCATTCAAAGACGATGATAGTTGATGATGAGTATATAATAGTAGGATCGGCCAACATAAACCAGAGATCAATGGATGGAGGCAGAGACACAGAAATTGCAATGGGGGCATTTCAACCACATCATCTAACAGAGGAAGAGAGTAGACCAAAAGGTCAGATTCATGGATTCAGAAGGGCATTATGGCTTGAGCATCTTAGAGATCAGGATGCTGAAGTGTTGGACCGTCCAGAGGGTGAAGATTGTGTGAAACTTGTGAATTATATTGCTGAAGAGAACTGGAAGTTATTCACAAAGGAAACATTCAGTGAAGATGATTCAATCAAATTTAATCATCTATTGCGTTACCCCGTTGATATAACCAAAAGTGGGGAAGTAATTGCACTTAAGGACTTTGAGTTCTTTCCTGACACCAAAGCTCGCATTCTAGGTACCAAATCTGAGTACCTTCCTCCTATCCTCACCACCTAA 2463 0.4125 MASLLHGTLCVTIVDVDKLHNRCNLDFCNKDTPHRGKRFLAQVKGCLLCRPELVGTRLYATVDLDKARVARTRMIRHQTTNPKWNETFHIYCAHKVSNIIFTVKDGNPIGATLIGRASVPVDQVLTGAPLNRQVEIYDDDLHRPVKGGSKIHVKIEFNHAVNDPYWSRGIKSPDFPGVPHVFFNQRKDCKVTLYQDAHVLNNFKVSIPLSGVNSDYTPGRCWEDIFSAIYNAKYLIYITGWSIYTEITLTRNSDKPSITLGELLLKKADEGVKVFMLVWDDRTSDELRKEGLMATHDQETAQYFRYSKVKCVLCPRNPDVGKSIIQGLQTSTMFTHHQKAVVADCDLDITGGSQKRTIVSFIGGIDLCDGRYDTHEHPLFSTLNTIHKNDFHQPNFPGASIKKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVEKIFLIPLTEHDEILVSPSEVKRSVDHETWTVQLFRSIDGGAVSGFPTDQDDAAEWGLVSGKNNVIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKATDIKVEAIGALHLIPKELSLKIVSKIKERQRFVAYIVIPMWPEGDPESASVQAILDWQRRTMEMMYTDIAEAIEEVGSKADPTDYLTFFCLGNREVEKPGEYVPPERPTPDTNYDKAQKARRFMIYVHSKTMIVDDEYIIVGSANINQRSMDGGRDTEIAMGAFQPHHLTEEESRPKGQIHGFRRALWLEHLRDQDAEVLDRPEGEDCVKLVNYIAEENWKLFTKETFSEDDSIKFNHLLRYPVDITKSGEVIALKDFEFFPDTKARILGTKSEYLPPILTT 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0722 820 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 661 688 IPR001736 GO:0003824
Mibi05g0722 820 Gene3D Endonuclease Chain A 478 708 - -
Mibi05g0722 820 Gene3D C2 domain 6 165 IPR035892 -
Mibi05g0722 820 FunFam Phospholipase D delta 212 451 - -
Mibi05g0722 820 CDD C2_plant_PLD 4 157 - -
Mibi05g0722 820 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Mibi05g0722 820 PANTHER PHOSPHOLIPASE D 4 808 IPR015679 -
Mibi05g0722 820 FunFam Phospholipase D 474 707 - -
Mibi05g0722 820 Pfam Phospholipase D Active site motif 332 371 IPR001736 GO:0003824
Mibi05g0722 820 Pfam Phospholipase D Active site motif 662 688 IPR001736 GO:0003824
Mibi05g0722 820 SUPERFAMILY Phospholipase D/nuclease 166 437 - -
Mibi05g0722 820 Pfam Phospholipase D C terminal 736 810 IPR024632 -
Mibi05g0722 820 SMART C2_3c 8 133 IPR000008 -
Mibi05g0722 820 PIRSF PLD_plant 1 820 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mibi05g0722 820 Gene3D Endonuclease Chain A 210 449 - -
Mibi05g0722 820 Pfam C2 domain 7 135 IPR000008 -
Mibi05g0722 820 SUPERFAMILY Phospholipase D/nuclease 495 699 - -
Mibi05g0722 820 SMART pld_4 332 371 IPR001736 GO:0003824
Mibi05g0722 820 SMART pld_4 661 688 IPR001736 GO:0003824
Mibi05g0722 820 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 158 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0722 Mibi-ChrMibi05 6820746 6824152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0722 4 820 Phospholipase D Gene Family (Wang group) AT3G15730 62.198 0.0 1044