Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0712 ATGGAAGCCACTGCTGGAATGGTGGCTGGATCGTATAAAAGGAACGAACTTGTTCGAATTCGTCATGATTCTGATAGTGGGCCCAAACCCTTGAAGAACTTGAATGGCCAAATCTGTCAAATATGTGGTGATACTGTGGGATTAACGGCAACTGGTGATGTTTTTGTTGCGTGCAATGAGTGTGCCTTCCCAGTTTGTCGTCCTTGTTATGAATATGAGCGAAAAGATGGGAACAAGTCTTGCCCCCAGTGTAAAACTAGGTACAAGAGGCACAAAGGGAGTCCAAGAGTGGAGGGAGATGATGATGAGGATGATGTTGATGATATAGAGAACGAGTTCAATTATGAGCAAGGAAAAACCAAATCTAGGCGGCAGTGGGAAGGAGAAGATGCTGACATCTCTTCGTCTGCTAGATATGATTCTCAACAACCAATTCCGCTCCTCACCAGCGGACAGCAGATGTCCGGTGAGATTCCGACACCTGATACCCAATCTGTGCGGACTACATCAGGTCCTTTGGGTCCATCTGAAAAGGTTCACTCACTTCCCTATATTGATCCAAGGCAACCAGTTCCAGTGAGAATTGTAGACCCTTCAAAGGACTTGAATTCCTATGGTCTTCCTAATGTTGACTGGAAAGAAAGGGTTGAAGGTTGGAAGCTCAAGCAGGAGAAAAACATGGTGCAAATGACTGGTAGTAGATACAATGAAGGGAAGGGTGACATGGAAGGAACAGGTTCTAATGGAGAAGAACTGCAGATGGTTGATGATATTCGACAGCCTTTGAGTCGTGTGGTGCCTATTTCTTCTTCTCACTTGACCCCTTATCGTGTTGTTATTATTCTTCGGCTTATTATTCTGGGCTTCTTCTTACAATACCGTGTGACTCATCCTGTGAAAGATGCATACCCCCTATGGCTGACATCAGTTATCTGTGAGATTTGGTTTGCCATGTCTTGGATTCTGGATCAGTTTCCGAAATGGTATCCCATTAATCGTGAGACTTTTCTTGACAGGCTTGCTTTAAGATTTGATCGTGATGGAGAACCATCTCAGTTGGTTCCTGTGGATGTTTTTGTTAGTACGGTGGATCCTCTCAAAGAGCCTCCTCTTGTGACTGCAAACACTGTTTTGTCGATACTAGCTGTTGATTACCCTGTGGACAAGGTTTCTTGCTATGTATCAGATGATGGTTCAGCTATGTTGACTTTTGAAGCCCTTTCAGAAACTGCTGAGTTTGCAAAGAAGTGGGTGCCCTTCTGCAAAAAGCACAATATTGAGCCAAGAGCCCCTGAGTTTTATTTTGCTCAGAAGATAGATTACTTGAAGGACAAGATTCAACCTTCATTTGTGAAGGAGCGCCGAGCAATGAAGAGAGAATATGAAGAATTCAAAGTTAGGATCAATGCCCTGGTAGCCAAAGCTCAAAAGATGCCAGAAGAAGGTTGGACAATGCAGGATGGAACTCCATGGCCTGGAAATAATCCAAGAGATCATCCTGGAATGATTCAGGTGTTCTTAGGTCATAGTGGAGGCCTTGATACTGATGGAAATGAGCTACCTAGACTTGTTTACGTTTCTCGTGAGAAGCGACCAGGCTTTCAGCATCACAAGAAGGCTGGAGCTATGAATGCTTTGATTCGAGTTTCGGCTGTCTTGACCAATGGTGCATATCTATTGAATGTCGATTGTGATCACTATTTCAATAACAGCAAAGCTCTTAAGGAAGCCATGTGTTTCATGATGGATCCTGTTTTGGGGAAGAAGACTTGCTATGTACAATTTCCACAGAGGTTTGATGGCATTGATTTGCATGATCGATATGCCAATCGCAATATTGTGTTCTTTGATATCAACATGAAAGGGCAAGATGGTGTCCAGGGCCCAGTCTACGTCGGAACTGGTTGTTGTTTCAATAGACAGGCTCTATATGGCTATGATCCTGTTTTGACTGAGGAAGACTTGGAGCCCAATATTATTGTGAAGAGTTGCTGGGGTTCTAGAAAGAAGGGAAAGGATAAGAAGTACATTGACAAGAAGAGGGCTGCAAAAAGAACTGAATCCACAATTCCCATCTTCAATATGGAAGACATAGATGAGGGTGTTGAAGGATATGATGATGAGAGATCACTTCTTATGTCTCAAAAGAGCTTAGAGAAACGTTTCGGTCAGTCCCCAGTTTTCATTGCTGCCACATTCATGGAGCAGGGCGGCATTCCTCCCTCAACTAACCCTGCGACCCTTCTCAAGGAAGCAATCCATGTCATCAGCTGTGGTTATGAAGACAAGACAGAATGGGGCAAAGAGATTGGCTGGATCTATGGTTCTGTGACTGAAGATATCTTGACTGGGTTCAAGATGCATGCACGTGGTTGGATCTCTGTCTATTGCATGCCGCTTCGACCTGCATTCAAGGGTTCTGCTCCCATCAATCTTTCTGACCGTCTTAACCAGGTGCTTCGGTGGGCCTTGGGGTCTATTGAGATTTTCCTTAGCAGGCATTGTCCCTTATGGTATGGCTACAACGGAAGATTGAAGCTCCTACAGAGGCTGGCCTATATCAACACAATTGTCTACCCCTTTACCTCCATCCCTCTGATTGCTTATTGTGTGCTCCCTGCATTTTGTCTTCTAACAAATAAATTTATTATTCCAGAGATAAGCAACTTTGCTAGCATGTGGTTTATTCTTCTTTTCGTCTCTATTTTCGCTACCTCAATTCTTGAGCTCAGGTGGAGTGGGGTTGGTATCGAAGACTGGTGGAGGAATGAGCAGTTCTGGGTTATTGGTGGTACATCTGCGCATCTTTTTGCTGTGTTCCAAGGGCTTCTGAAAGTGCTTGCCGGGATTGACACAAACTTTACTGTGACGTCAAAGGCATCAGATGATGATGGGGACTTTGCTGAGCTTTACGTGTTCAAATGGACATCACTACTGATCCCTCCTACAACAGTCCTTATAGTGAACATAATAGGGATCGTTGCCGGTGTTTCCTATGCCATTAACAGCGGATACCAATCGTGGGGTCCTCTATTTGGAAAGCTGTTCTTTGCTATATGGGTGGTTGCCCATCTTTACCCATTCTTGAAGGGTCTGCTTGGAAGGCAAAATCGTACCCCAACCATTGTTATTGTTTGGTCTATTCTCCTTGCTTCTATATTCTCCTTGCTGTGGGTGAGGATCGATCCCTTCACTTCCGACACCTCAAATACTTCTAGCAATGGTCAATGTGGCATCAACTGCTAG 3246 0.443 MEATAGMVAGSYKRNELVRIRHDSDSGPKPLKNLNGQICQICGDTVGLTATGDVFVACNECAFPVCRPCYEYERKDGNKSCPQCKTRYKRHKGSPRVEGDDDEDDVDDIENEFNYEQGKTKSRRQWEGEDADISSSARYDSQQPIPLLTSGQQMSGEIPTPDTQSVRTTSGPLGPSEKVHSLPYIDPRQPVPVRIVDPSKDLNSYGLPNVDWKERVEGWKLKQEKNMVQMTGSRYNEGKGDMEGTGSNGEELQMVDDIRQPLSRVVPISSSHLTPYRVVIILRLIILGFFLQYRVTHPVKDAYPLWLTSVICEIWFAMSWILDQFPKWYPINRETFLDRLALRFDRDGEPSQLVPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFAKKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKMPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALKEAMCFMMDPVLGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGQDGVQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCWGSRKKGKDKKYIDKKRAAKRTESTIPIFNMEDIDEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISVYCMPLRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGRLKLLQRLAYINTIVYPFTSIPLIAYCVLPAFCLLTNKFIIPEISNFASMWFILLFVSIFATSILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNIIGIVAGVSYAINSGYQSWGPLFGKLFFAIWVVAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFTSDTSNTSSNGQCGINC 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0712 1081 MobiDBLite consensus disorder prediction 135 175 - -
Mibi05g0712 1081 MobiDBLite consensus disorder prediction 74 185 - -
Mibi05g0712 1081 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Mibi05g0712 1081 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Mibi05g0712 1081 FunFam Cellulose synthase 21 112 - -
Mibi05g0712 1081 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Mibi05g0712 1081 FunFam Cellulose synthase 473 647 - -
Mibi05g0712 1081 SUPERFAMILY Nucleotide-diphospho-sugar transferases 374 656 IPR029044 -
Mibi05g0712 1081 MobiDBLite consensus disorder prediction 112 134 - -
Mibi05g0712 1081 Coils Coil 454 474 - -
Mibi05g0712 1081 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 260 1047 - -
Mibi05g0712 1081 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 514 656 IPR029044 -
Mibi05g0712 1081 SUPERFAMILY RING/U-box 22 111 - -
Mibi05g0712 1081 Pfam Cellulose synthase 356 1073 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mibi05g0712 1081 Pfam Zinc-binding RING-finger 29 106 IPR027934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0712 Mibi-ChrMibi05 6729518 6735921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0712 1 1079 Glycosyltransferase AT4G32410 86.716 0.0 1913