Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0686 ATGGCTCACCATAACATTAACAATAACAATGGAAACAACAGTAATAGCCAACAGTTCGTGAAAACCGTTTTCCATGATTTTCTTGGCTCCAATCCCAATGATTCCCTTTCCCTTTTTGCCCCCAAAACCCCCAACATGAGGCTCTCTGAGGCCTCGCCCTCCGCCGCCTCCTCCGTCGTTGGCCGTGGTCCCTTCTCCGCCACTTCCGACATCGGCTCGGAAAGACATGCCGGAAATCATCTGGAGGGAGTTCCATTTTATGGACATAGGAGTGATAGGAGTGATTTTTCAGACACTGGGCTAAGCAACAGACTAATAGGAAACAAGAGAAGTAGTTCTGAGACCGCTTTTATGGGATCCTCCAGAGACGCCTTCCAAATGGCCCCTGATTCCATTCAAAACTCACACTTCATGAAAATGTTCCGGAGTACAGCAGGAGGAGAACATCATAGAAGATCTAATGATGATGAGGTTTTTCATGGCATGCAGTCGCTGAAGCCAACTTCCGCTTCTCAGATATTTCAGCCTCTTTCTGGAACTAAATTTGATGCTAGTAGATGGGAACGGTCTGTTGTAATGAACGTTGGCCCTTCGATGCAGCATCCACCACGTGGGGCTCAATCAACACCTTTTGTGCACCAGATAGCTTCAAACAAGGCCAGGGAGACCAATGTTGGCCCTTCATTTATATCTCAGTCAGCTGCTGATGAAGGATCTAGAACTGGAATGAAAGGCCCTGGAATTTTGAGCTCTATGAACATCACAACTGCTGCCACTGAAAGAACCCCATCTGCAGTGGTGCTTCGTGGAGGTAGGCCAAAGCCTATGATGAATATAATTGATTTAGAAACGTCCACTTCTCTGAGCCAACATGAGTTGAGATCCGCCAGCAGCCAGATGACCATATTCTATGGAGGTCAAGCTCACGTATTTGATAATGTCCACCCTAATAAGGCAGATGTTATAATGAGCTTAGCAGGGTCAAATGGAGGGAGTTGGTCCACAAGCACTTGCTCGCCCAAGCCTCTTGTGAAGCAGCCACTTCATGATACTGCAGAAACTCAAACTGGCAAGCTTCATGTTCATGCCACTCCACCACCACCAGCTGGGCGACCTCATGGAAGTCTTGCTACTAAAGAAGATATTGGAAGAAACCCAGTTGAAGTGGCCGAGCTAGATCCCATTTCTCAAGAGAAGAGAGGCCAATGA 1209 0.4731 MAHHNINNNNGNNSNSQQFVKTVFHDFLGSNPNDSLSLFAPKTPNMRLSEASPSAASSVVGRGPFSATSDIGSERHAGNHLEGVPFYGHRSDRSDFSDTGLSNRLIGNKRSSSETAFMGSSRDAFQMAPDSIQNSHFMKMFRSTAGGEHHRRSNDDEVFHGMQSLKPTSASQIFQPLSGTKFDASRWERSVVMNVGPSMQHPPRGAQSTPFVHQIASNKARETNVGPSFISQSAADEGSRTGMKGPGILSSMNITTAATERTPSAVVLRGGRPKPMMNIIDLETSTSLSQHELRSASSQMTIFYGGQAHVFDNVHPNKADVIMSLAGSNGGSWSTSTCSPKPLVKQPLHDTAETQTGKLHVHATPPPPAGRPHGSLATKEDIGRNPVEVAELDPISQEKRGQ 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0686 402 MobiDBLite consensus disorder prediction 86 107 - -
Mibi05g0686 402 Pfam tify domain 295 327 IPR010399 -
Mibi05g0686 402 ProSiteProfiles Tify domain profile. 293 328 IPR010399 -
Mibi05g0686 402 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 142 360 IPR040390 -
Mibi05g0686 402 SMART tify_2 293 328 IPR010399 -
Mibi05g0686 402 MobiDBLite consensus disorder prediction 352 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0686 Mibi-ChrMibi05 6481803 6485823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0686 21 326 Tify Gene Family AT4G32570 38.924 7.88e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mibi05g0686 tify 1.1e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1996 08 37221441 37225015 Mibi05g0686 05 6481803 6485823 CCT