Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0646 ATGGAACTTTCTCCCTCCTCCTCTTCTTTGATAGCACGCCAAACATGGGAGCTTGAGAACAACATAATCCCAATGGATTCTCCCACTACCAGCGAAAACCAAGCCTCCGACGCCATCTTCTACTACGACGAAGCCGCCCAGGCCGAGTTTCAGAGGAGCAAGCCTTGGGTTAATGATCCCCACTACTTTAAACGCGTTAAGATCTCTGCTCTTGCCCTTCTCAAGATGGTTGTTCATGCTCGCTCTGGTGGCACCATTGAAGTCATGGGTCTTATGCAGGGCAAGACTGATGGTGATGCCATCATCGTTATGGATGCCTTCGCTTTGCCTGTTGAAGGCACTGAAACTCGTGTCAATGCCCAAGCTGATGCCTATGAATATATGGTTGATTATTCTCAGACTAACAAGCAGGCTGGGCGTTTGGAAAATGTTGTTGGATGGTATCATTCCCACCCTGGTTATGGATGCTGGCTTTCTGGCATTGATGTGTCTACGCAAATGCTGAATCAGCAATTTCAAGAGCCCTTTCTGGCTGTTGTCATTGATCCAACTAGGACGATTTCTGCTGGAAAAGTTGATATTGGAGCATTCAGGACATACCCAGAAGGTTATAAGCCTCCAGACGAGCCTGTCTCTGAGTACCAAACGATCCCTTTAAACAAGATTGAAGACTTTGGTGTTCACTGTAAACAGTACTATGCGTTGGATATCACCTACTTTAAGTCTTCTCTTGATTCACATCTCTTGGATCTTCTGTGGAACAAATATTGGGTGAATACTCTTTCATCTTCTCCATTGTTGGGTAATGGAGACTATGTCGCCGGACAAATATCTGATCTAGCTGAGAAGCTGGAACAAGCAGAAAACCAGTTGGCACACCCTCGCTTTGGGTCAATAATAGGTCCTCCTCAAAAAAAGAAAGGAGAAGAATCCCCACTTGCTAAGATTACTCGAGACAGTGCAAAAATTACTGTAGAGCAAGTACATGGTTTGATGTCACAGGTCATCAAGGACATCCTCTTCAACTCTGTTGGTCAAGCAAACAAATCTACCGCTGAGGCATCTGACCCTGAACCAATGATTGAAAGCTGA 1092 0.4533 MELSPSSSSLIARQTWELENNIIPMDSPTTSENQASDAIFYYDEAAQAEFQRSKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTISAGKVDIGAFRTYPEGYKPPDEPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHPRFGSIIGPPQKKKGEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVGQANKSTAEASDPEPMIES 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0646 363 ProSiteProfiles MPN domain profile. 66 203 IPR037518 -
Mibi05g0646 363 CDD MPN_RPN11_CSN5 55 327 - -
Mibi05g0646 363 SMART pad1_6 65 202 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mibi05g0646 363 FunFam COP9 signalosome complex subunit 5 6 268 - -
Mibi05g0646 363 Gene3D Cytidine Deaminase, domain 2 5 268 - -
Mibi05g0646 363 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 57 352 - -
Mibi05g0646 363 SUPERFAMILY JAB1/MPN domain 65 202 - -
Mibi05g0646 363 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 63 174 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mibi05g0646 363 Pfam Cop9 signalosome subunit 5 C-terminal domain 262 342 IPR040961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0646 Mibi-ChrMibi05 6191303 6194926 Dispersed/Wgd