Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0645 ATGTGTGTGCGACGGATCTTAATCGAATCATCACAACGCAAAATGATTACATACAACAGTTGTATGTGTATGAATTTCGGGAGAAGTTGTATGGCAGAAGAAAAGAATAACCAGGAAGGATACATAGTTGCCTACCATATCAGCACATATATATATAAACACATACTCACACCTATCACTCCCTCCATTTCTGTATCTCTTAGCTTCCTTTTCTCTTTGTTCCTCCATCTCACCATGCCAGGCGACAAGGGCATCTCTCTCGACGAGATCAAAAATGAGACCGTCGATTTGGAAAAAATCCCAATAGAGGAAGTGTTCGAGCAGCTGAAATGTTCAAGAACAGGTCTAACATCAGACGAAGGAGCCAATCGGCTTCAAGTGTTTGGTCCAAACAAATTGGAAGAGAAAAAGGAAAGCAAACTTTTGAAGTTCCTGGGTTTTATGTGGAACCCTCTGTCATGGGTCATGGAAGCTGCTGCTATAATGGCCATTGCTTTGGCCAATGGAGGAGGAAGACCCCCAGATTGGCAAGACTTCGTAGGTATCATTGTTCTTCTCCTTGTCAACTCCACAATCAGTTTCATTGAAGAAAACAATGCTGGAAATGCTGCTGCTGCACTTATGGCTGGTTTAGCTCCCAAGACCAAGGTTCTGAGAGATGGCCGATGGACTGAACAAGATGCTGCAATTTTAGTGCCGGGAGATGTAATCAGTATCAAGCTAGGAGATATTATCCCAGCTGATGCACGTCTTCTGGAGGGTGATCCTTTGAGTGTTGATCAGTCCGCTTTAACTGGGGAGTCTCTTCCTGCGACTAAGAACCCTTCAGATGAAGTATTTTCTGGATCAACTGTTAAAAAGGGTGAGATTGAAGCAGTTGTGATTGCCACTGGTGTTCACACTTTCTTTGGTAAAGCAGCTCATTTGGTGGATAGTACTAACCAAGTTGGTCACTTCCAGAAAGTCCTCACAGCAATTGGTAATTTCTGTATTTGTTCAATTGCTGTTGGGATAGTGATTGAGCTCATAGTGATGTACCCGATCCAGCATCGAAAGTATAGGGATGGAATCGACAACCTTTTGGTTCTGTTGATCGGAGGAATCCCGATTGCCATGCCTACTGTCTTGTCAGTGACTATGGCCATTGGTTCTCATAGGTTGTCTCAACAAGGTGCTATCACTAAGAGGATGACTGCTATTGAGGAAATGGCAGGAATGGATGTTTTGTGCAGTGACAAGACTGGGACCCTCACATTGAACAAGCTTAGTGTTGATAAGAACTTGATTGAGGTGTTTGCTAAAGGTGTGGAGAAGGAGTTTGTGATCCTTCTAGCAGCAAGGGCTTCCAGAACTGAGAATCAGGATGCCATAGATGCTGCAATTGTTGGCATGCTAGCTGATCCAAAGGAGGCTCGAGCTGGAATCAGGGAGGTTCATTTTCTGCCGTTTAATCCCGTGGACAAGAGGACTGCTCTTACATATATTGATTCTGATGGAAGTTGGCATAGGGCTAGTAAAGGTGCTCCTGAGCAGATTTTGAACCTTTGCAACTGCAAAGAGGATGTAAGGAAGAGGGTTCACACATGTATTGACAAGTTTGCTGAGCGTGGACTTCGTTCTTTAGGTGTTGCGAGACAGGAAGTGCCAGAAAAGTCGAAAGATGCTGCAGGGGCACCATGGCAATTTATTGGTTTGTTACCTCTGTTTGATCCTCCTAGGCATGACAGTGCTGAGACCATCAGAAGAGCTCTTCACCTTGGTGTCAATGTCAAGATGATTACTGGTGATCAGCTTGCCATTGCCAAGGAAACCGGACGAAGGCTTGGAATGGGCACAAACATGTACCCATCTTCTTCATTGCTGGGAGGAGACAAGGATGCTACTGTTTCAGCTCTTCCGGTCGACGAATTGATTGAGAAGGCTGATGGATTTGCAGGAGTCTTTCCTGAGCACAAGTATGAAATAGTGAAAAGATTGCAAGAGAGGAAGCATATATGTGGCATGACAGGAGATGGTGTGAATGATGCACCTGCATTGAAGCGAGCAGATATTGGAATTGCTGTTGCTGATGCTACTGATGCTGCTAGGAGTGCTTCTGACATTGTCCTCACTGAACCCGGTTTGAGTGTTATTGTCAGTGCAGTGCTGACCAGCAGGGCTATTTTCCAGAGGATGAAGAACTACACTATTTACGCTGTTTCCATCACTATTCGTATTGTGTTTGGTTTCTTGTTTATAGCATTGATCTGGAAGTTTGATTTTGCACCCTTCATGGTTCTGATTATTGCCATACTAAATGATGGAACCATTATGACAATATCCAAGGATCGAGTGAAGCCATCCCCACAGCCTGACAGTTGGAAACTGAAGGAGATATTTGCTACCGGGGTTGTGCTTGGAGGTTACTTGGCACTGATGACAGTTGTATTTTTCTGGGCTATATACGATACCAACTTCTTCTCGGACAAGTTTGGTGTGAGGTCTCTGAGAGACAGACCTAATGAAACGATGGCAGCCTTGTATCTACAAGTCAGTATTATAAGCCAAGCCTTAATTTTTGTCACTAGGTCTCGTAGCTGGTCCTATGTTGAAAGACCTGGTCTCCTCCTTCTCGGCGCTTTCTTAGTTGCTCAGCTGGTAGCAACTTTGATTGCTGTGTATGCACACTGGGAATTTGCAAGGATTAAGGGAATGGGATGGGGATGGGCTGGTGTTATCTGGCTATACAGTATAGTGACATATATCCCTCTTGATCTGCTCAAATTTGCTATTCGCTATGGTCTCAGTGGGAAGGCTTGGGATAATATTTTGGAGAACAAGACTGCCTTCACTACCAAGAAAGATTATGGGAAAGAAGAGAGGGAAGCACAGTGGGCAGCTGCACAGAGAACTCTTCATGGTCTTCAGCCACCAGAAACTACTAACCTTTTCAATGACAAAAGTAGCTACAGGGAGCTTTCTGAGATTGCAGAGCAAGCCAAGCGACGAGCTGAGGTTGCAAGGCTAAGGGAGCTACACACTCTTAAGGGACACGTTGAATCGGTGGTGAAGCTGAAGGGACTTGACATTGATACAATTCAGCAGCATTATACAGTGTAA 3099 0.446 MCVRRILIESSQRKMITYNSCMCMNFGRSCMAEEKNNQEGYIVAYHISTYIYKHILTPITPSISVSLSFLFSLFLHLTMPGDKGISLDEIKNETVDLEKIPIEEVFEQLKCSRTGLTSDEGANRLQVFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIVLLLVNSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWTEQDAAILVPGDVISIKLGDIIPADARLLEGDPLSVDQSALTGESLPATKNPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVIELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKGVEKEFVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGSWHRASKGAPEQILNLCNCKEDVRKRVHTCIDKFAERGLRSLGVARQEVPEKSKDAAGAPWQFIGLLPLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGGDKDATVSALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPQPDSWKLKEIFATGVVLGGYLALMTVVFFWAIYDTNFFSDKFGVRSLRDRPNETMAALYLQVSIISQALIFVTRSRSWSYVERPGLLLLGAFLVAQLVATLIAVYAHWEFARIKGMGWGWAGVIWLYSIVTYIPLDLLKFAIRYGLSGKAWDNILENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETTNLFNDKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0645 1032 FunFam Plasma membrane ATPase 213 297 - -
Mibi05g0645 1032 FunFam ATPase 4 plasma membrane-type 654 896 - -
Mibi05g0645 1032 FunFam Plasma membrane ATPase 562 717 - -
Mibi05g0645 1032 SUPERFAMILY Calcium ATPase, transduction domain A 213 310 IPR008250 -
Mibi05g0645 1032 Gene3D - 213 297 - -
Mibi05g0645 1032 FunFam Plasma membrane ATPase 422 569 - -
Mibi05g0645 1032 Gene3D - 175 896 - -
Mibi05g0645 1032 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 115 887 IPR006534 GO:0008553|GO:0016020|GO:0120029
Mibi05g0645 1032 CDD P-type_ATPase_H 115 922 IPR006534 GO:0008553|GO:0016020|GO:0120029
Mibi05g0645 1032 Pfam E1-E2 ATPase 212 389 - -
Mibi05g0645 1032 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 641 759 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi05g0645 1032 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 182 428 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi05g0645 1032 Gene3D - 981 1032 - -
Mibi05g0645 1032 SFLD Haloacid Dehalogenase 392 721 - -
Mibi05g0645 1032 PANTHER CALCIUM-TRANSPORTING ATPASE 98 964 - -
Mibi05g0645 1032 Coils Coil 983 1003 - -
Mibi05g0645 1032 PRINTS P-type cation-transporting ATPase superfamily signature 586 596 - -
Mibi05g0645 1032 PRINTS P-type cation-transporting ATPase superfamily signature 692 704 - -
Mibi05g0645 1032 PRINTS P-type cation-transporting ATPase superfamily signature 564 575 - -
Mibi05g0645 1032 PRINTS P-type cation-transporting ATPase superfamily signature 260 274 - -
Mibi05g0645 1032 PRINTS P-type cation-transporting ATPase superfamily signature 410 424 - -
Mibi05g0645 1032 PRINTS P-type cation-transporting ATPase superfamily signature 669 688 - -
Mibi05g0645 1032 SUPERFAMILY HAD-like 406 716 IPR036412 -
Mibi05g0645 1032 PRINTS H+-transporting ATPase (proton pump) signature 641 657 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi05g0645 1032 PRINTS H+-transporting ATPase (proton pump) signature 841 862 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi05g0645 1032 PRINTS H+-transporting ATPase (proton pump) signature 669 685 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi05g0645 1032 PRINTS H+-transporting ATPase (proton pump) signature 700 725 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi05g0645 1032 PRINTS H+-transporting ATPase (proton pump) signature 526 544 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi05g0645 1032 SFLD p-type atpase 392 721 IPR044492 -
Mibi05g0645 1032 SMART Cation_ATPase_N_a_2 96 168 IPR004014 -
Mibi05g0645 1032 Gene3D - 407 706 IPR023214 -
Mibi05g0645 1032 Pfam haloacid dehalogenase-like hydrolase 406 683 - -
Mibi05g0645 1032 SUPERFAMILY Calcium ATPase, transmembrane domain M 96 926 IPR023298 -
Mibi05g0645 1032 ProSitePatterns E1-E2 ATPases phosphorylation site. 412 418 IPR018303 -
Mibi05g0645 1032 Pfam Cation transporter/ATPase, N-terminus 99 162 IPR004014 -
Mibi05g0645 1032 Gene3D - 422 569 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0645 Mibi-ChrMibi05 6173420 6180543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0645 85 1032 Primary Pumps ATPases AT2G07560 84.388 0.0 1635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2037 08 37620931 37628012 Mibi05g0645 05 6173420 6180543 CCT