Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0635 ATGACCCGGTCACCCGGTGACGCAAACCCTCAATATATCTCTCACCCAGCCTCTCTTGCCTCTACTCTTTCCCCTTCCCTTCACCCAAATCTCAAATCGACCAGTCCTTCGTGTTCTTCCTCCTCCTATGACCCTTTAACAAAATTTCACTTCCCAGTATTCCTCCTTTTCCCTTTGGTTGAAGCCTCTGATCTGATGGCTGTGGAGCTCATGGGGTTCCCCAAAATCGACGACCAGAAAGCCATCCAGGAGGCTGCATCCGAAGGCCTCAAAGGCATGGAGCACCTGATCCGCCTCCTCTCTCACCACCAACAACAACAACCCAACCGTATCGACTACACAGACCTCACCCATGTAACCGTCTCCAACTTCAAAAAACTCATCTCCCTCTTGAACCGTACCGGCCACGCGCGCTTCAGGCGAGCCCCCATCCACGCGCCCTCCTCCTCCGCCCCGGCCCCTCAGACGCACTCCGTCGGTTCATCCCCCGCGAAGTTCACGCCCCCGGCCAACGCGTCGCAGGCGCTTGCACATCACGCGCCGGCTAGTTTGACGCTTGATTTCACGAGGCCTAATAACATTGTGGGCTCTAATAAGAGTAAGCCCTTGGAGTTTGAGTTCTCGAAGGAAACGTTTAGCGTATCGTCGAACTCTTCGTTTATGTCGTCGGCTATTACTGGTGATGGTAGTGTTTCTAACGGTAAGCAAGGTTCCTCTCTGTTGTTGACTCCGGCGGCGGTTTCCGGTGGGAGACCGCCGCTTTCCTCCGGTCCGTACAAGAAAAGGTGCCACGACCACCGTGATCGCTCCGATGATGTCTCCGGCTCTGGGAAATGTCACTGTGTTAAGAGAAGGAAATATAGGGTGAAGAAGACGGTGAGGGTGCCGGCGATAAGTTCAAAGATAGCGGACATTCCTCCGGACGAGTTCTCTTGGAGGAAGTACGGACAGAAGCCGATCAAGGGCTCGCCATACCCACGAGGGTACTACAAGTGCAGCACGGTGAGGGGGTGTCCGGCGAGGAAGCACGTGGAGCGAGCGACGGATGATCCGACGATGCTGATTGTGACGTACGAGGGGGAGCATCGACATGTGATTCAGGGTGCGATGCAGGAGAACATGGCCGGGAATGTGGGTTTGGTGTTTGAGTCAACGTGA 1158 0.5518 MTRSPGDANPQYISHPASLASTLSPSLHPNLKSTSPSCSSSSYDPLTKFHFPVFLLFPLVEASDLMAVELMGFPKIDDQKAIQEAASEGLKGMEHLIRLLSHHQQQQPNRIDYTDLTHVTVSNFKKLISLLNRTGHARFRRAPIHAPSSSAPAPQTHSVGSSPAKFTPPANASQALAHHAPASLTLDFTRPNNIVGSNKSKPLEFEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSSLLLTPAAVSGGRPPLSSGPYKKRCHDHRDRSDDVSGSGKCHCVKRRKYRVKKTVRVPAISSKIADIPPDEFSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPTMLIVTYEGEHRHVIQGAMQENMAGNVGLVFEST 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0635 385 Gene3D WRKY domain 292 366 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g0635 385 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 80 366 IPR044810 GO:0003700
Mibi05g0635 385 MobiDBLite consensus disorder prediction 244 277 - -
Mibi05g0635 385 MobiDBLite consensus disorder prediction 149 169 - -
Mibi05g0635 385 MobiDBLite consensus disorder prediction 145 176 - -
Mibi05g0635 385 SUPERFAMILY WRKY DNA-binding domain 304 364 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi05g0635 385 Pfam Plant zinc cluster domain 260 304 IPR018872 -
Mibi05g0635 385 Pfam WRKY DNA -binding domain 308 364 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g0635 385 ProSiteProfiles WRKY domain profile. 301 367 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g0635 385 FunFam WRKY transcription factor 65 290 367 - -
Mibi05g0635 385 SMART WRKY_cls 306 366 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi05g0635 385 MobiDBLite consensus disorder prediction 258 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0635 Mibi-ChrMibi05 6132168 6133999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0635 66 384 WRKY Transcription Factor Family AT2G24570 61.398 3.83e-113 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi05g0635 WRKY 2.1e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0635 05 6132168 6133999 Mibi05g0635 05 6132168 6133999 ECH