Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi05g0630 | ATGGAGTTAAAAAATGAGAAGCTAGTTAGGTTTTACGATGATGGTAAACAGAAAGTAGAACTTTCTTTGGATAAGGCATGGTCAGTATACAAGGTACACGCAGCTGTAAACTCTGAAGGCAAACCTGTGAGTGGTGATAAGAACAAAATTAACCTAAAAATTCCTTCTTTGGGAAAGTTTAAGGTATTCCCAGAAAACCATGAACCATTGAAGAAGAGAATCCTTGATCCTGGAAGTGACATTTATTTGCAGTGCAACCGGGTTTTCCTCTGTTCTTGCATTGTGGCTCTATTTGTTGACCCATTGTTTTTCTACCTTCCCTCAGTGGCAAATGATGAAAAGTCAGCGTGTATGGCTACTGATCTGAGCATTGGAATTGTACTGACATGTTTCCGAACATTGGCTGATATTTTCTATCTGTTGAACATGCTCATAAAGTTCAGAACAGCTTATATATCACCAAGTTCAAGGATTTTTGGAAGGGGTGAGTTGGTCATGGATCCAAGGTTGATTGCAACACGGTATTTAAGTTCAAAGAAATTCTTCATAGATCTTGTAGCTACACTACCTCTTCCTCAGATCATGATTTGGTTTATAATGCCTGCAATTAGAAGCTCTCACGCTGATCACACCAACAATGCTCTTGTTCTGATTGTTCTGCTTCAATATGTTCCCAGATTATATTTGATTTTCCCCTTAAGTTCTCAGATTATCAAAGCCACTGGTGTAGTCACAAAGACAGCTTGGGCTGGAGCCGCTTACAATCTTTTACTTTACATGTTGGCTAGCCATGTGTTGGGGGCATCATGGTACTTGTTGTCAATTGAGAGGAATGCCACATGTTGGAAATCACAATGCAAGAATGAAACTCTCCCCATGAAATGTGTTCTTCAATACTTGGATTGCAGCAGTTTAAACAATGATGATCGCATGAAGTGGGTAAACACCACTTCTGTGTTTGATAACTGCAATCCAAATAATGACATCAGTTTCCAGTATGGCATTTTTGGACGTGCAGTTGAAAACAATGTTGTTTCCTCACAGTTTTTGGAGAAATATCTCTTTTGTCTATGGTGGGGCCTACAAAATTTGAGTTCATATGGCCAGAATTTGAGTACAAGCACATTCATTGGGGAAACTACATTTGCTATAGTTATAGCCATCCTGGGTCTAGTTTTGTTTGCCCACTTGATTGGAAACATGCAGACATATCTGCAATCTATCACTGTAAGGCTTGAGGAATGGAGGCTCAAGCGACGTGATACTGAAGAATGGATGAAACACCGTCAACTCCCACAAAATATAAGGGAACGTGTTCGAAGATTTGTCCAATACAAGTGGCTCGCAACTCGAGGAGTTGATGAAGAATCTATCTTGCAAGGCCTTCCCATAGACTTGCGTAGAGATATCCAACGCCACCTTTGCCTAGACCTTGTTCGACGTGTCCCTTTTTTCTCACAAATGGATGGTCAATTACTTGATGCAATATGTGAGAGATTGGTTTCATCCTTGAGTACTCAAGGCACTTATATTGTCAGAGAAGGAGATCCAGTCACAGAGATGCTTTTCATCATAAGAGGAAGACTTGAAAGCTCAACTACAAATGGAGGCAGAACGGGTTTCTTCAACTCAATTACATTAAGACCTGGTGATTTCTGTGGAGAAGAGCTATTAGCATGGGCATTACTTCCAAAAAATACTTCCAATTTTCCCTCTTCTACTAGAACAGTGAAAACCCTCATGGAAGTCGAAGCCTTCGCACTAAGAGCTGAGGATCTTAAGTTTGTTGCCAATCAGTTTCGCCGTCTCCACAGCAAGAAGCTGCAGCACACCTTTCGTTTCTACTCTCACCATTGGAGGACATGGGCAGCCTGCTTCATTCAAGCTGCATGGAGAAGGTACAAAAAGAGAAAGCTAGCGGAGAGCCTTAGTTTGAAGGAATGTCAATCATTTACTTATGATGTAATGAGACATGAAGAAGAGGAGGAGCCTAGTTATGTGAGTTCAAGTGCGAATTCATTAGGTGTCACTATACTTGCTTCAAGATTTGCTGCAAACACAAGGAGAGGAGCTCAGAGGGTTAAGCATCTTGAAATGCCTAAGTTGCAAAAGCCTGAAGATCCAGACTTCTCAGTGGAAGCAGATGATGATTAG | 2154 | 0.4099 | MELKNEKLVRFYDDGKQKVELSLDKAWSVYKVHAAVNSEGKPVSGDKNKINLKIPSLGKFKVFPENHEPLKKRILDPGSDIYLQCNRVFLCSCIVALFVDPLFFYLPSVANDEKSACMATDLSIGIVLTCFRTLADIFYLLNMLIKFRTAYISPSSRIFGRGELVMDPRLIATRYLSSKKFFIDLVATLPLPQIMIWFIMPAIRSSHADHTNNALVLIVLLQYVPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERNATCWKSQCKNETLPMKCVLQYLDCSSLNNDDRMKWVNTTSVFDNCNPNNDISFQYGIFGRAVENNVVSSQFLEKYLFCLWWGLQNLSSYGQNLSTSTFIGETTFAIVIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMKHRQLPQNIRERVRRFVQYKWLATRGVDEESILQGLPIDLRRDIQRHLCLDLVRRVPFFSQMDGQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKNTSNFPSSTRTVKTLMEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRKLAESLSLKECQSFTYDVMRHEEEEEPSYVSSSANSLGVTILASRFAANTRRGAQRVKHLEMPKLQKPEDPDFSVEADDD | 717 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi05g0630 | 717 | Gene3D | Jelly Rolls | 482 | 602 | IPR014710 | - | |
| Mibi05g0630 | 717 | SUPERFAMILY | cAMP-binding domain-like | 414 | 606 | IPR018490 | - | |
| Mibi05g0630 | 717 | Gene3D | - | 89 | 410 | - | - | |
| Mibi05g0630 | 717 | MobiDBLite | consensus disorder prediction | 694 | 709 | - | - | |
| Mibi05g0630 | 717 | SUPERFAMILY | Voltage-gated potassium channels | 77 | 406 | - | - | |
| Mibi05g0630 | 717 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 66 | 710 | - | - | |
| Mibi05g0630 | 717 | Pfam | Ion transport protein | 86 | 411 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
| Mibi05g0630 | 717 | FunFam | Cyclic nucleotide-gated ion channel 1 | 411 | 475 | - | - | |
| Mibi05g0630 | 717 | FunFam | Cyclic nucleotide-gated ion channel 1 | 482 | 600 | - | - | |
| Mibi05g0630 | 717 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 484 | 568 | IPR000595 | - | |
| Mibi05g0630 | 717 | Gene3D | Helix hairpin bin | 412 | 475 | - | - | |
| Mibi05g0630 | 717 | CDD | CAP_ED | 484 | 615 | IPR000595 | - | |
| Mibi05g0630 | 717 | SMART | cnmp_10 | 484 | 612 | IPR000595 | - | |
| Mibi05g0630 | 717 | MobiDBLite | consensus disorder prediction | 694 | 717 | - | - | |
| Mibi05g0630 | 717 | Pfam | Cyclic nucleotide-binding domain | 507 | 595 | IPR000595 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi05g0630 | Mibi-ChrMibi05 | 6082222 | 6085627 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi05g0630 | 10 | 713 | Ion Channels | AT2G24610 | 70.000 | 0.0 | 1030 |