Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0629 ATGACACGTTGTAGTGAAACATCCATGGCATTAGCTTCTAATGCTAGAAGCTTGTTCTCCATCTACAGTGAACAGAACCAAGAGAGTTCCAAGTTAAAGGCAACAATAAACCCAGACGGCAAAATGGGGATTGATGATAAAAACAGAGTCAAACTAGAAACTTCTTCACCTGGAAAGCACATGGTATTCCCAGAAAAACATGAACAGAGGAGGAGGAAGAAGAAGAATAAGGTGGTGATGATGATTTTTGATCCTGGAAGTGAGGCATCTTTGCTGTGGGACCGGGTTTTCCTTGGTTCTTGCATACTGGCCCTCTTTATTGATCCTCTGTTTTTATATGTGCCCAAATCAGAAAATGATGGAGTGTCATCATGTATTACCACTGATTCGAGTTTGGCAATTGTTCTGACTTGTTTCCGTACATTGGCTGATATTTTGTATCTTACGAACATACTCATCAAGTTCAGAACAGCCTATGTAGACCCAAATTCAAGGGTTTTTGGGAGAGGTGAGCTAGTTATGGATCCATGGTTGATTGCCAAACGGTATTTGAGATCAGAATTTATCATTGATCTTGTAGCCACACCTCCCCTTCCTCAGATCCTGATTTGGCTTATTGGAAGCTCCCATGCTGATCACACCAACAATGCTCTTATACTGATCATTCTACTCCAATATTTTCCCAGATTGTATTTGATTTTCCCATTAAGGTCTCAGATTATCAAGGCGGTTGGGGTAGTTACAAAGACAGCTTGGGCAGGAGCTGCTTATAATCTTCTACTATACATGTTGGCTAGCCATGTGTTGGGAGCATCATGGTATTTGTTCTCGTTTGAAAGGAACATCACTTGTTGGCAATCTGAATGCAAACGTGAGAGTCAATGTGCTATTAAGTACTTGAATTGCGGAACTTCAAACAATGATGATCGCTTAAAGTGGGTCAACGCTACTTCTGTGTTTAGTAACTGCAATCCATCAAACAGCCAAAGTTTCGAGTATGGCATTTTTCAACCAGCTGTTAGCTACAACGTTAGTTCCATACAGTTTGTTCATAAGTACGTCTATTGTCTGTGGTGGGGCTTGCAGAATCTGAGCTGCTATGGCCAAGGATTGATTGCAAGCAAGTTCATAGGGGAAACTACATTTTCAATATTCGTATGTATCATAGGTTTGGTTTTGTTTGCACACTTGATTGGAAACATGCAGAAATATTTGCAATCTATAAATGTGAGAGTTGAGCAATGGAGACTGAAGCGACGTGATATGGAAGGGTGGATGGAACATCGTCAACTTCCACGACATTTGAGAGAACTTGTTCAAAGATTTATTCAATACAAGTGGCTTGCAACTCAAGGAACCGATGAGGACTCTATCTTGCAAGGCCTTCCGAAAGACCTACGTAGAGATATTCAACGTTACCTTTGCTTAGATCTTATTCGACGTGTCCCGTTTTTCTCACAAATGGATGATCTGTTACTTGACGCAATATGTGAGAGGCTGATTTCTTCCTTGAGTACTAAAGGCACTTACATTGTGAGAGAAGGAGATCCAGTGACAGAGATGCTTTTCATAATAAGAGGAAGACTTGAAAGCTCAACCACTAATGGTGGAAGGACAGGTTTCTTCAACTCTAATATATTGAAAGCTGGTGATTTCTGTGGAGGAGAGTTACTATCATGGGCATTGCTTCCAACATCCACTCTCAATTTGCCTTCTTCTACCAGAACAGTCAAAGCCCTTGTGCAAGTAGAGGCCTTTGCATTAAAAGCTCAAGATCTCAAGTTTGTGGCGAACCAGTTTCGTCGGTTTCACAGCAAGAAGCTGCAGCACACCTTCCGTTTCTACTCACACAATTGGAGGACATGGGCTGCCTGCTTCATTCAGGCTTCTTGGAGAAGGTACAAGAATAATAAAATGCTTCTTGGAGGACATAGTCAGCAAGTGCTTAATACTGTGACTTCAAGAATAAGTTCAGTGAGTGAACCTATAGCCATATCAGGACTTAAGACAAAATCAAGAAGAGGAGCTATGATGCTCATGGATATTGAGTTGCCCATGTTACAAAAGCCTCAAGAGCCAGACTTCTCAAAGGAATCAGAGGATATTTAA 2109 0.412 MTRCSETSMALASNARSLFSIYSEQNQESSKLKATINPDGKMGIDDKNRVKLETSSPGKHMVFPEKHEQRRRKKKNKVVMMIFDPGSEASLLWDRVFLGSCILALFIDPLFLYVPKSENDGVSSCITTDSSLAIVLTCFRTLADILYLTNILIKFRTAYVDPNSRVFGRGELVMDPWLIAKRYLRSEFIIDLVATPPLPQILIWLIGSSHADHTNNALILIILLQYFPRLYLIFPLRSQIIKAVGVVTKTAWAGAAYNLLLYMLASHVLGASWYLFSFERNITCWQSECKRESQCAIKYLNCGTSNNDDRLKWVNATSVFSNCNPSNSQSFEYGIFQPAVSYNVSSIQFVHKYVYCLWWGLQNLSCYGQGLIASKFIGETTFSIFVCIIGLVLFAHLIGNMQKYLQSINVRVEQWRLKRRDMEGWMEHRQLPRHLRELVQRFIQYKWLATQGTDEDSILQGLPKDLRRDIQRYLCLDLIRRVPFFSQMDDLLLDAICERLISSLSTKGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSNILKAGDFCGGELLSWALLPTSTLNLPSSTRTVKALVQVEAFALKAQDLKFVANQFRRFHSKKLQHTFRFYSHNWRTWAACFIQASWRRYKNNKMLLGGHSQQVLNTVTSRISSVSEPIAISGLKTKSRRGAMMLMDIELPMLQKPQEPDFSKESEDI 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0629 702 SUPERFAMILY cAMP-binding domain-like 413 607 IPR018490 -
Mibi05g0629 702 SUPERFAMILY Voltage-gated potassium channels 87 406 - -
Mibi05g0629 702 Gene3D Helix hairpin bin 409 475 - -
Mibi05g0629 702 PRINTS EAG/ELK/ERG potassium channel family signature 264 274 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi05g0629 702 PRINTS EAG/ELK/ERG potassium channel family signature 353 370 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi05g0629 702 PRINTS EAG/ELK/ERG potassium channel family signature 379 390 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi05g0629 702 PRINTS EAG/ELK/ERG potassium channel family signature 397 406 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi05g0629 702 PRINTS EAG/ELK/ERG potassium channel family signature 151 160 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi05g0629 702 PRINTS EAG/ELK/ERG potassium channel family signature 447 454 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi05g0629 702 Pfam Ion transport protein 92 412 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi05g0629 702 ProSiteProfiles cAMP/cGMP binding motif profile. 484 554 IPR000595 -
Mibi05g0629 702 SMART cnmp_10 484 615 IPR000595 -
Mibi05g0629 702 Pfam Cyclic nucleotide-binding domain 507 595 IPR000595 -
Mibi05g0629 702 Gene3D Jelly Rolls 482 602 IPR014710 -
Mibi05g0629 702 CDD CAP_ED 484 615 IPR000595 -
Mibi05g0629 702 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 67 695 - -
Mibi05g0629 702 FunFam Cyclic nucleotide-gated ion channel 1 482 600 - -
Mibi05g0629 702 Gene3D - 121 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0629 Mibi-ChrMibi05 6077571 6081730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0629 32 696 Ion Channels AT2G24610 60.455 0.0 854