Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0628 ATGAAGGATCCATCAGTGAAGCATGAGAAAGAGAGTGGTAATGGAATAGTGGCAATTGGAATAGACAAAGACAAGGGGAGTCAATATGCACTCAAATGGGCAAATGAACATCTCCTCACCAAAGGCTCAACCCTAGTTCTCATCCATGTCATTGTTCTAGAAGCTTCATATGTAGCGAGAGCTTTGATTGGCAATATGGTTTGCCTTGCCAATATATTGTTACAGATTGATGTACTGAGCTGCATAAGGCATCTAAACATGGTTCTCCTCCTGGGAGCATGTCCAGAGTATGGCTGCCTTGTCTATGACTATGAGTACATGGCCAACGGAAGCTTAGAAGATCGCCACTTTCGTCACGGAAACACTCCCTCTCTTCCTTGGAATCTTAGGTTCAAAATTGCAGTGGGAATAGTCACTGGCTTGTTGTTTCTGCACCAGAGAAAACAAGAGCATCTGGTGCACAGGGACTTGAAACCAGCTAACATCCTGCTTGACAGCAACTATGTGCCCAAAATCAGTGATGTAGGCTTAGCCAGGCTAATTCCACCGTCTTCAACTGACGCTAGACCACCCATGGGTTTGACCCATCAGGTTGAGAGAGCTATTGAGAAAAGAGCATTTTCTCAGATATTGGATCCAACAGTGCCTGACTGGCCTCTAGAGAAGGCCTTGAGCCTGGCAACCATGGCATTAAAGTGTTCCCAGTTAAGGCGAAAAGATCGTCCTGACCTTGCCAGGGTTGTCTTACCCCGAACTTAA 759 0.4585 MKDPSVKHEKESGNGIVAIGIDKDKGSQYALKWANEHLLTKGSTLVLIHVIVLEASYVARALIGNMVCLANILLQIDVLSCIRHLNMVLLLGACPEYGCLVYDYEYMANGSLEDRHFRHGNTPSLPWNLRFKIAVGIVTGLLFLHQRKQEHLVHRDLKPANILLDSNYVPKISDVGLARLIPPSSTDARPPMGLTHQVERAIEKRAFSQILDPTVPDWPLEKALSLATMALKCSQLRRKDRPDLARVVLPRT 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0628 252 Pfam Protein kinase domain 71 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0628 252 FunFam Os07g0541700 protein 107 190 - -
Mibi05g0628 252 ProSiteProfiles Protein kinase domain profile. 6 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0628 252 PANTHER OS02G0152300 PROTEIN 188 250 - -
Mibi05g0628 252 Gene3D Transferase(Phosphotransferase) domain 1 5 198 - -
Mibi05g0628 252 SUPERFAMILY Protein kinase-like (PK-like) 13 248 IPR011009 -
Mibi05g0628 252 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Mibi05g0628 252 SMART serkin_6 8 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0628 Mibi-ChrMibi05 6073204 6074199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0628 9 56 Receptor kinase-like Gene Family AT5G35380 47.917 5.34e-06 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mibi05g0628 Pkinase 5.3e-17 CL0016