Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0620 ATGTGTAGTGGTGCCTCCCAGACCAAACCTTCAGCTCTCTCGATTTCCCATCTGGCCGTCGTGCCTACTTGCCGGAATCCCCTCTTCACTCTCCTTTTTCTGCTCACTATCGTCCAGAAGTTCGTGGAAGCAATCAAAATGTCTTCCTCATATCTCCCTGCGACAACAGAGAGTATCGCACAGGCTCTGGAGGCCAAATACCCATCCGAGGCCATCTCTATTCTTTATCGTGTGCTTGAGAACCCCTCTGCATCTCCAGAAGCTTTACGTATTAAAGAGCAGGCCATCACAAACCTCTCTGATCTTCTCAGGCAAGAAAATAGGGCAGAGGACCTGCGGAGCCTTCTCACTCAGTTGAGGCCATTCTTTTCTTTAATCCCAAAGGCAAAAACTGCAAAAATAGTGAGGGGAATAATTGATTCTGTTGCTAAGATACCAGGTACATCTGATCTACAAATTGCACTCTGCAAAGAAATGGTGCAGTGGACTCGAGCTGAAAAGCGTACTTTTCTGAGGCAGCGAGTTGAGGCAAGGCTTGCAGCCCTTCTTATGGAAAATAAGGAGTATGCAGAAGCTTTGACACTCCTTACTGGCCTGGTCAAGGAGGTTAGAAGATTGGATGACAAACTTCTTCTTGTGGACATAGACTTGTTGGAAAGCAAGCTGCACTTCTCCTTAAGGAACCTTCCAAAGGCGAAAGCTGCCCTCACAGCAGCAAGAACAGCTGCTAATGCTATTTATGTGCCCCCTGCTCAGCAAGGTGCCATTGATTTGCAAAGTGGGATTCTTCACGCAGAGGAGAAGGATTATAAGACTGCATATAGTTATTTCTTTGAAGCTTTTGAGTCCTTCAATGCACTTGAAGATCCCAAGGCTGTTTTTAGCCTAAAATACATGTTGTTGTGTAAGATTATGGTTAGTCAAGCTGATGATGTGGCGAGCATTATATCTTCTAAAGCAGGCCTCCAATATGTTGGTCCTGATTTGGATGCCATGAAAGCTGTTGCAGATGCACATTCTAAACGTTCCCTTAGGTTGTTTGAAATTGCTTTGCGAGACTACAAGGCACAGTTGGAGGAAGACCCAATTGTCCACAGGCACCTGTCATCCCTTTATGATACCCTTCTGGAGCAGAACCTTTGCAGATTAATCGAGCCATTCTCAAGGGTCGAGATCGCGCATATTGCTGAGCTAATTGAACTTCCCATTGATAGCGTGGAGCGGAAGCTGTCTCAGATGATTTTGGACAAGAAGTTTGCTGGGACATTGGATCAAGGTGCTGGATGCCTCGTCATATTTGATGATCCCAAGAGTGACGCCATATATCCTGCAACCTTGGAAACCATCTCCAACATAGGAAAGGTTGTGGACAGCCTTTATGTTAGGTCTGCCAAAATCATGGCATAA 1407 0.457 MCSGASQTKPSALSISHLAVVPTCRNPLFTLLFLLTIVQKFVEAIKMSSSYLPATTESIAQALEAKYPSEAISILYRVLENPSASPEALRIKEQAITNLSDLLRQENRAEDLRSLLTQLRPFFSLIPKAKTAKIVRGIIDSVAKIPGTSDLQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMENKEYAEALTLLTGLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANAIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALEDPKAVFSLKYMLLCKIMVSQADDVASIISSKAGLQYVGPDLDAMKAVADAHSKRSLRLFEIALRDYKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHIAELIELPIDSVERKLSQMILDKKFAGTLDQGAGCLVIFDDPKSDAIYPATLETISNIGKVVDSLYVRSAKIMA 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0620 468 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 80 464 - -
Mibi05g0620 468 SUPERFAMILY "Winged helix" DNA-binding domain 360 442 IPR036390 -
Mibi05g0620 468 FunFam 26S proteasome non-ATPase regulatory subunit 11 92 467 - -
Mibi05g0620 468 Pfam PCI domain 331 432 IPR000717 -
Mibi05g0620 468 ProSiteProfiles PCI domain profile. 269 437 IPR000717 -
Mibi05g0620 468 SUPERFAMILY TPR-like 175 369 IPR011990 GO:0005515
Mibi05g0620 468 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 366 449 - -
Mibi05g0620 468 Pfam 26S proteasome regulatory subunit RPN6 N-terminal domain 60 174 IPR040773 -
Mibi05g0620 468 Coils Coil 92 112 - -
Mibi05g0620 468 Pfam 26S proteasome subunit RPN6 C-terminal helix domain 439 464 IPR040780 -
Mibi05g0620 468 Gene3D - 92 467 - -
Mibi05g0620 468 Coils Coil 172 192 - -
Mibi05g0620 468 SMART PINT_4 366 449 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0620 Mibi-ChrMibi05 5997240 5999828 Dispersed/Wgd