Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0618 ATGGGGATAGCAGAAGCATGCTCCAGGATCATTGGAGACTTTTTGCAAGCTTTTAGAGGCTCACAAGAAATCTCAAAGCCTCATCAAGTTGATCACAACAATGATGCTCCCTGCAAGCCCGGGAATGTGATTCAACTTGATGACAAGATAGTGGGTGCTCTCATCACTGTGTTTGGCATGGAAAACAATGGAAGAATCAAGAAGGAAAATGCTAGGCAAGTGGTGGAGAAGCTGGGTTTGCTATATGGTTCAGAGCAAGACAAGTCCTCATCAGGAGGGTTTGAACTTCCTAGCCAGGGAGGATTGGAAGATGAAGAGGTTCCTGTGGAAGAAGTGCTTGATGGAATGGAAGATATGTCGAGGCGAAGCGAGTTATTACACGAGGCCTTCAAAATCTTTGACGAAGATGGAGATGGATACATAGATGCAATGGAGTTGAAGAGGGTTCTGGATTGCTTGGGTTTGGATAAAGGTTGGGACATGAGTGCCATTGAGAGAATGGTGAATGTTGTAGATTTAAACTTTGATGGTAAGGTTGACTTCAGCGAGTTTGAGTTGATGATGGGGTAG 570 0.4456 MGIAEACSRIIGDFLQAFRGSQEISKPHQVDHNNDAPCKPGNVIQLDDKIVGALITVFGMENNGRIKKENARQVVEKLGLLYGSEQDKSSSGGFELPSQGGLEDEEVPVEEVLDGMEDMSRRSELLHEAFKIFDEDGDGYIDAMELKRVLDCLGLDKGWDMSAIERMVNVVDLNFDGKVDFSEFELMMG 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0618 189 Pfam EF-hand domain pair 125 188 IPR002048 GO:0005509
Mibi05g0618 189 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 62 188 - -
Mibi05g0618 189 ProSiteProfiles EF-hand calcium-binding domain profile. 159 189 IPR002048 GO:0005509
Mibi05g0618 189 ProSitePatterns EF-hand calcium-binding domain. 134 146 IPR018247 -
Mibi05g0618 189 ProSiteProfiles EF-hand calcium-binding domain profile. 121 156 IPR002048 GO:0005509
Mibi05g0618 189 CDD EFh 126 184 IPR002048 GO:0005509
Mibi05g0618 189 SUPERFAMILY EF-hand 56 188 IPR011992 -
Mibi05g0618 189 FunFam Calmodulin A 95 189 - -
Mibi05g0618 189 Gene3D - 99 189 - -
Mibi05g0618 189 SMART efh_1 163 189 IPR002048 GO:0005509
Mibi05g0618 189 SMART efh_1 125 153 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0618 Mibi-ChrMibi05 5980733 5981302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0618 57 188 EF-hand Containing Proteins AT5G44460 40.426 1.93e-19 79.7