Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0614 ATGCTATCTCTCAAGTCAGTGTTTCGTTCGCTAGTGAAGGAGGCGAAACGTACCCGAATCAAAGGAGAATTTTGTTTCACCATGCAAAAGGAGAAGGAATCAAGGTGCAAGGAGCTCCTAGAGATGGAGATGGAGGTGGAGACATGTGGAGGAAAAGAGGAAACCCTACCACCAGGGTTTAGATTCCATCCATCAGATGAAGAACTCATCACTTGCTATCTCATCAACAAGATCTCTGATTCTAGCTTCACTGGAAGAGCCATTGCTGATGTAGATCTCAACAAATGCGAGCCTTGGGACCTCCCTGGGAAGGCGAAGATGGGAGAGAAAGAATGGTACTTTTTCAGTTTGAGAGATCGAAAGTACCCTACAGGAGTGAGAACGAACCGAGCAACCAACACAGGTTACTGGAAAACCACAGGGAAAGACAAGGAAATCATGAACACCGCCACGTCAGAGCTCATTGGCATGAAGAAGACTTTGGTTTTCTACAAAGGAAGGGCCCCAAGAGGCCAGAAATCCAACTGGGTCATGCACGAATACCGCATCCACTCCAAATCCCACAAGCAAGATGAATGGGTGGTATGCCGAGTGTTTCAGAAGAGTGGGAGTAGTAGTGGGGTAAAGAAGTTCCCTCCCAATAGCCATACAAGACCACCTCTCCTCAATCCTTATTATGGCCTCGACTTTGCAAGTTTCACTACTGGTGCTACCAATATTCATTTGCCACAACCCATGAATCTGATGCAACTTCCAGATAATCCAGCAGCTCATTTTCTGTACGGAAGAAACAACAACATGATGATGAATAATCACCATTCTGTGAACCTACCAATGCAATCCCACTGCTTCAACTATCCAGTTCCAGCTTCTTCTTCAGCAGGATTCAGTATCTCAGGTCTAAATCTGAATCTGGGAAGTAATAATAATAATGCACCACCCGGTTCTCCATCATCACAACCCTTTTTGCCACTATTCACTAGTAACCAACACGATTTGGTCACTTCTAACAACAACGTTGTCACACATGTCACTTCTCTCGGCGCCGACAACCTAGGAGGCTATGGTGGTGTGGATATGAGCAACATCAATCCTCAGACTCAGATTAGTAATAATAGATACATGGCCATGGCGGATCACTGTGTGGATCTCGATGCTTTCTGGCCTTCTTACTAA 1176 0.4541 MLSLKSVFRSLVKEAKRTRIKGEFCFTMQKEKESRCKELLEMEMEVETCGGKEETLPPGFRFHPSDEELITCYLINKISDSSFTGRAIADVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIMNTATSELIGMKKTLVFYKGRAPRGQKSNWVMHEYRIHSKSHKQDEWVVCRVFQKSGSSSGVKKFPPNSHTRPPLLNPYYGLDFASFTTGATNIHLPQPMNLMQLPDNPAAHFLYGRNNNMMMNNHHSVNLPMQSHCFNYPVPASSSAGFSISGLNLNLGSNNNNAPPGSPSSQPFLPLFTSNQHDLVTSNNNVVTHVTSLGADNLGGYGGVDMSNINPQTQISNNRYMAMADHCVDLDAFWPSY 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0614 391 Pfam No apical meristem (NAM) protein 57 183 IPR003441 GO:0003677|GO:0006355
Mibi05g0614 391 ProSiteProfiles NAC domain profile. 56 201 IPR003441 GO:0003677|GO:0006355
Mibi05g0614 391 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 53 280 - -
Mibi05g0614 391 SUPERFAMILY NAC domain 52 201 IPR036093 GO:0003677|GO:0006355
Mibi05g0614 391 FunFam NAC domain-containing protein 100-like 65 205 - -
Mibi05g0614 391 Gene3D NAC domain 65 204 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0614 Mibi-ChrMibi05 5945831 5950015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0614 52 391 NAC Transcription Factor Family AT2G24430 47.826 4.26e-98 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi05g0614 NAM 5e-40 No_clan