Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0612 ATGAAAAATATGGAAAGGGAACGAACCCGGAAACGGCCTCGTCTAACGTGGGACGATGCTCCATCTTCTGAGACCGAGGCTCAAAGGGCTCTTGTGATGGGTGATGGAGTTTTTCAAAATAGGCATGCATCGCCTCCAAGAAGGGACGACGATCGTGAAGGCCATTATGTGTTTAATCTTGGCGAAAATCTCACTCCTAGATATAAAATCCTCAGCAAAATGGGTGAAGGCACATTTGGTCGGGTTTTGGAATGTTGGGACCGCGAAACTCGAGAATATGTGGCCATCAAAGTAGTTAGAAGCATACCAAAGTATCGTGATGCAGCAATGATTGAGGTCGATGTGCTTCAACGTCTAGTGAAGAATGAGAAGAATGAGAGAGGCTATTCACGTTGTGTACACATTCAGAACTGGTTTGATTATCGGAATCATATATGTATAGTATTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTTAAGAGAAATAAATACTGCTCATTCCCTGTGGATCTTGTTCGGGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGACCTACGCCTAATCCACACTGACTTGAAGCCAGAAAATATACTTCTGGTTTCTTCTGAATTCATAAAGATCCCTAGCTATAAGAGGGTTTTCTCAGACGAAATGCAATTCAAGTGCTTGCCCAAGTCTAGTGCTATTAAACTGATTGATTTTGGTAGTACTGCATTTGATAACCAGAATCATAGCTCCATTGTTTCTACAAGGCATTATCGAGCCCCTGAGATAATTCTAGGTCTAGGGTGGTCATACCCATGTGATTTGTGGAGTGTCGGGTGTATTCTTGTTGAACTAATTATGGGGAAAGCATTGTTTCAAACTCACGAAAACTTAGAGCACTTGGCAATGATGGAGAGAGTGCTGGGGCCCGTCCCTGAGCATATGGCTCGAAGGTCTAACCGAGGTGCCGAAAAGTATTTTAGGCATGGAACACGACTAAATTGGCCTGAAGGGGCTGTTTCAAGGGAGAGTATTCGAGCAGTGAGGAAGCTTGATCATCTAAAGGAACTTGTAGCACGTAATGTGGACTCTTCAAGCTCCTCTTTAACTGACCTATTACATGGATTATTGGCTTATGATCCGTCTGACCGTCTAACGGCTCATGAAGCCCTTGATCATCCCTTCTTTAGGAATTCTACTTGA 1203 0.4306 MKNMERERTRKRPRLTWDDAPSSETEAQRALVMGDGVFQNRHASPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRETREYVAIKVVRSIPKYRDAAMIEVDVLQRLVKNEKNERGYSRCVHIQNWFDYRNHICIVFEKLGPSLFDFLKRNKYCSFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKIPSYKRVFSDEMQFKCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEIILGLGWSYPCDLWSVGCILVELIMGKALFQTHENLEHLAMMERVLGPVPEHMARRSNRGAEKYFRHGTRLNWPEGAVSRESIRAVRKLDHLKELVARNVDSSSSSLTDLLHGLLAYDPSDRLTAHEALDHPFFRNST 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0612 400 ProSiteProfiles Protein kinase domain profile. 68 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0612 400 SUPERFAMILY Protein kinase-like (PK-like) 55 398 IPR011009 -
Mibi05g0612 400 FunFam Serine/threonine-protein kinase AFC2 147 396 - -
Mibi05g0612 400 Gene3D Transferase(Phosphotransferase) domain 1 122 396 - -
Mibi05g0612 400 CDD PKc_CLK 55 396 - -
Mibi05g0612 400 FunFam Serine/threonine-protein kinase AFC2 55 151 - -
Mibi05g0612 400 Pfam Protein kinase domain 68 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0612 400 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 16 398 - -
Mibi05g0612 400 MobiDBLite consensus disorder prediction 1 26 - -
Mibi05g0612 400 Coils Coil 106 126 - -
Mibi05g0612 400 Gene3D Phosphorylase Kinase; domain 1 55 151 - -
Mibi05g0612 400 MobiDBLite consensus disorder prediction 1 19 - -
Mibi05g0612 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Mibi05g0612 400 SMART serkin_6 68 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0612 Mibi-ChrMibi05 5931902 5935778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0612 67 398 Core Cell Cycle Gene Families AT3G48750 27.193 1.78e-28 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Mibi05g0612 Pkinase 6.5e-52 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0612 05 5931902 5935778 Mibi05g0612 05 5931902 5935778 ECH