Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0585 ATGATATGCAATTTCACCTCTGTATGGATGGATTTTGGAAATGATGTGCTTCAATCATCTCATTCTGAACTGAGACTATTTCAGTATGATTTGAAGACACGCAACCACTGTCTTCTTCTTGCCAAATTCTACAAGAAGGACATTTCAATCACTATTACTTCTCAAGGTTCTGTGGTTCGTAGATGGTTGAGAATCACCACTCATCTTTACAAGCCTTTTCTTGGCAATCTCATGGTTGGTTTAGGCGTTCAATGGACTCAAAAGTCTTCCTCTGCTTCAACACTATCGACATTAACGTTGGATTCGAAAGCGAAATGGCTGATTGGTTTTGACAATTTCCTGCCATTATCAATGGAGCAGAGTGAAACCGTTTCTGACTTCGCATCACGGAAATTGGTTCGCCAATTGGATTTCACGGCCATCGGCGGAAATTCTGTGAACGTAGAATTGCCAAAGGCACCTGAATCTATGATACACTTGGAACTTTCACCGCAGACGCAGAAACCACAATCGATTTTGCTTCCAAAATCAATTTCGCCGTCTCAAGTAAAAATTGAGGCGAAGTTGCAGACGCAGGTATACTCACCGACACAGTCAAGGTTACATTTACGGTCGCCGGGGCAACCGCCATGGTTATCTTCACAGACACAACAACAGAGAACACCGAAATCTCAGGTCAATCAGAAATCGAAACTTGTTTCACCTGTTAGTCGAATTTCGCATCCTGTGCAGAAAATTTCGATGACGGCGTTACATTTACTGAAGCCAGAGTCTCCTAGTAAACGACCTTGGCATAATGTGGAATCAAAAGACAGCACTCCAAAGAAGCAAAAGCAGTGCAACTGCAAGAACTCTCGATGCCTCAAACTATACTGTGAGTGTTTTGCAGCTGGGATCCATTGTGATGGTTGCAACTGTTTAAATTGTCATAATAATGTGGATAATGAGGCCGCCAGACAGGAGGCTGTTGGAATAGTTTTAGAGCGCAATCCAAATGCTTTCAGACCAAAAATTGCTAGCAGTCCACAAGAACCACAAGGTTCCAAGGAAGAGGCTGAAACTCAAGTATTAGGGAAGCATAATAAAGGATGTCACTGCAAGAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGTTTCCAAGCCAATGTCCTCTGCTCAGAAAATTGTAAATGCTTGGACTGCAAAAATTTTGAAGGAAGTGAAGAAAGAAGTGCTCTTTATTCAATTAACCTCAAACAGGCAGCTAATGTAGCCATCAGTCAAGCAATTGGGTCCTCTGGGTATGGAATTGATATAACACCCAAGAGAAGAAAGCTTGAGGAAATATTTGCTGGCAAAGCTGCCGTAGATCAAGATGTTTTGACCGCTCAATTCCAGCAGGAAAATGATCCAGCGGTTGCATCACCTGGTCCTGGTCCTGGTCCGTCTGTGTCTGTTGCCTCTGACATTGCCAATGTAACAATTCCTGTGTCTTCAAGATCAACATACATGTCCCCATTGGCGAATGCCCTCCAGCCACAGGATGTGAAGCATCTCTGTTCACTTTTTGTTGTTCTATCAGGAGTGGCCGCAAAGTCGTATGCAGAGTCAAGAAGCAGGGCAGGCCTTCAAATGGAGATAAAGAAATTTGAGACTTCTGTTGCTTCATCAGCTGAATTACTGGAAGACAAAAAAGTACACGAGCCTTGTTTTGATGTTCATGCAAAGAACAATGTAGCAGAGAGAAGTGGAACTTGTGATTCTGGATCAGATGGAGATGATGTACAGAACAACGGGAGGCCATTGTCACCAGAGACGCTAGCATTGATGTGTTATGAACAAGATGAGATGTTTCTTTCCAATAGTTCTGCCAATGCCGTGCCTGGCAACGATAAAAAAATGATTTATAAGACATCAAATTCTGATGTTTACATGGACATTTATGGAGAGCAGGAACGGCTTGTGCTCACCAGGTTTTGGGATGTTCTCCGTGGACTCATCACTCGTGGAAGCATAAAAGAAGAGATGTCCTCCCCATTTGCCAAGAAAGAGGTGGGAAGCAAACAAGCAGCAGCTGATAATGGCAATAACGAAATTGATTTAAGAAATGAGAAGGGGAAAGGATTTCACATGCACAGCAATTGCATTGCAAAATCTCAAACCCAATTAGCCACAAAAGTAATAGAGACAAGCAGTGCAATGCCTAATGGACAAGACAATGATGATCTGTCATTGAGGATCGGTCTGCCTACTGGGATTGCTGGGTTGACGTAA 2253 0.4288 MICNFTSVWMDFGNDVLQSSHSELRLFQYDLKTRNHCLLLAKFYKKDISITITSQGSVVRRWLRITTHLYKPFLGNLMVGLGVQWTQKSSSASTLSTLTLDSKAKWLIGFDNFLPLSMEQSETVSDFASRKLVRQLDFTAIGGNSVNVELPKAPESMIHLELSPQTQKPQSILLPKSISPSQVKIEAKLQTQVYSPTQSRLHLRSPGQPPWLSSQTQQQRTPKSQVNQKSKLVSPVSRISHPVQKISMTALHLLKPESPSKRPWHNVESKDSTPKKQKQCNCKNSRCLKLYCECFAAGIHCDGCNCLNCHNNVDNEAARQEAVGIVLERNPNAFRPKIASSPQEPQGSKEEAETQVLGKHNKGCHCKKSGCLKKYCECFQANVLCSENCKCLDCKNFEGSEERSALYSINLKQAANVAISQAIGSSGYGIDITPKRRKLEEIFAGKAAVDQDVLTAQFQQENDPAVASPGPGPGPSVSVASDIANVTIPVSSRSTYMSPLANALQPQDVKHLCSLFVVLSGVAAKSYAESRSRAGLQMEIKKFETSVASSAELLEDKKVHEPCFDVHAKNNVAERSGTCDSGSDGDDVQNNGRPLSPETLALMCYEQDEMFLSNSSANAVPGNDKKMIYKTSNSDVYMDIYGEQERLVLTRFWDVLRGLITRGSIKEEMSSPFAKKEVGSKQAAADNGNNEIDLRNEKGKGFHMHSNCIAKSQTQLATKVIETSSAMPNGQDNDDLSLRIGLPTGIAGLT 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0585 750 MobiDBLite consensus disorder prediction 254 277 - -
Mibi05g0585 750 PANTHER TESMIN/TSO1-RELATED 159 665 IPR028307 -
Mibi05g0585 750 MobiDBLite consensus disorder prediction 196 239 - -
Mibi05g0585 750 SMART CXC_2 359 400 IPR033467 -
Mibi05g0585 750 SMART CXC_2 275 315 IPR033467 -
Mibi05g0585 750 MobiDBLite consensus disorder prediction 574 593 - -
Mibi05g0585 750 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 362 396 IPR005172 -
Mibi05g0585 750 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 277 312 IPR005172 -
Mibi05g0585 750 ProSiteProfiles CRC domain profile. 276 399 IPR005172 -
Mibi05g0585 750 MobiDBLite consensus disorder prediction 258 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0585 Mibi-ChrMibi05 5676352 5684822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0585 127 667 CPP Transcription Factor Family AT4G29000 45.487 7.06e-127 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mibi05g0585 TCR 3.2e-12 No_clan