Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0577 ATGGCAAAAATGAGCGAGCGTTTGGTTGTGTTCATCATAATCCTTTCTTTGCTATTGGATGTGAAATCCCAGGGAACATCAGAAAGCACAGAAGATATGCCACAAAACTTCCATCCAAGTAAAGGAGCTATAATAGCAATCCTCACGGTTATGTTTGCCATATCATTTCTCCTACTGGCATATGTAAAGTTCTGTAAAATCCGATCCACTGAGTCTCTAAACCCGGATATGAACAATCCAGGAATAAGCCGATCAAGGTCAAGATATTCCGGGATAGACAAACAAGTAATAGAAGCACTTCCATTCTTCAAGTTCTCTTTACTGAAAGGATCAAAAGAAGGCCTAGAGTGTGCAGTTTGCCTCTCAAAATTCGACGACGCCGAGATCCTTAGGTTGCTTCCCAAGTGTAAGCACGCCTTCCACATGAATTGCATCGACAAGTGGCTCGAATGTCACTCCACATGCCCTCTTTGCAGGTACAAGGTTGACCCTGGAGACATCAAAACATTCAATTCCTCCATTAGCTCAAGGTTCCTTCGAGTTCCTTCCGACATAGCAGAGGTTCCAGATCTTGAAATCTTCGTGCAGAGAGAGCAATCAAACCAGAGCAATCAAATGAGGAAACCTGCGAACAGGTTGAATCACAAGATAGTGATATCCGATGTTGCTACGAGGAGCAGGTGGAGCGATCTGAATTCATCGGACTTGTTGTCGTTGAATTCTGAGATCCTGAGTGCGATGTCGAGCGCCACGTTTTCAGGTTCGAACGAGGAAGACAACTCGTTTACGTTGTTGAATGGTGGAGGGGAGAAGAGATCGATGTCGGAGATAGCGAACGTGGCGAGATTTCCAGAGATGAGAGTGAAGGACGATGTGAGGGAAGAGAGAGTGAGGAGGATTTGGTTGCCGATGGTTGAACGGACAGTACAGTGGTTTGCGAGACAAGACAGTATATCGACACAACCCAAACACAAAGACACAGCATTTGCTTCCAATGTCTGA 1002 0.4521 MAKMSERLVVFIIILSLLLDVKSQGTSESTEDMPQNFHPSKGAIIAILTVMFAISFLLLAYVKFCKIRSTESLNPDMNNPGISRSRSRYSGIDKQVIEALPFFKFSLLKGSKEGLECAVCLSKFDDAEILRLLPKCKHAFHMNCIDKWLECHSTCPLCRYKVDPGDIKTFNSSISSRFLRVPSDIAEVPDLEIFVQREQSNQSNQMRKPANRLNHKIVISDVATRSRWSDLNSSDLLSLNSEILSAMSSATFSGSNEEDNSFTLLNGGGEKRSMSEIANVARFPEMRVKDDVREERVRRIWLPMVERTVQWFARQDSISTQPKHKDTAFASNV 333
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0577 333 SMART ring_2 117 158 IPR001841 -
Mibi05g0577 333 Pfam Ring finger domain 116 159 IPR001841 -
Mibi05g0577 333 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 165 IPR013083 -
Mibi05g0577 333 CDD RING-H2_PA-TM-RING 116 159 - -
Mibi05g0577 333 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 25 316 - -
Mibi05g0577 333 SUPERFAMILY RING/U-box 112 164 - -
Mibi05g0577 333 FunFam RING-H2 finger protein ATL43 92 166 - -
Mibi05g0577 333 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi05g0577 Mibi-ChrMibi05 5557265 5558266 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0577 37 316 C3H Transcription Factor Family AT2G20030 38.304 6.60e-69 218