Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0572 ATGACTGCAGAAACCCAGAACTCTGAAACAGAAAGCACCTCAAACTCAAGCTCATTCCCATCTTCCCCAACCTCCCCACACTCTCCTCCTTCAGCTCTGCCTCTGCAAAACTATGTTTCACAAGCCAACAAAGCAGAGAGCCCAGAATCCAAAAAAGTGAAGAGAATTCGAGACTCCGGCAAGCACCCAGTGTACAGAGGAGTTCGCATGAGAAACTGGGGGAAATGGGTGTCCGAAATTCGCGAGCCTCGCAAGAAATCAAGAATATGGTTGGGTACATTTCCGACACCAGAAATGGCAGCCAGAGCACATGACGTGGCAGCTCTTAGCATCAAAGGAAGCTCTGCTATCCTCAATTTCCCCGAACTCATCAACCTGCTTCCTCGTCCCGCGTCTCTCGCTCCTCGAGATGTGCAGGCGGCGGCGGCCAAGGCGGCTCAGATGGAAAAGTTTGACCTGCCGACATCGTCATCTTCATCGTCGCTTTCTTCACTTGTTTCAGCAATGGACTTGAGTACAGAGTCAGAGGAATTAAGCGAGATAATAAAGTTGCCAAATTTGGAAACCAACAATGAAGATGGGGTGGAATTGGTGAAGGAATTTGTGTACTTTGAATCTGTAGAGGGATGGATGTATGAACCACCATGGTTACAGAGCATGGAGGATTGTCATGGGTATGTGGCCGATCAGCTGTGGAATTACTGA 705 0.4879 MTAETQNSETESTSNSSSFPSSPTSPHSPPSALPLQNYVSQANKAESPESKKVKRIRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGSSAILNFPELINLLPRPASLAPRDVQAAAAKAAQMEKFDLPTSSSSSSLSSLVSAMDLSTESEELSEIIKLPNLETNNEDGVELVKEFVYFESVEGWMYEPPWLQSMEDCHGYVADQLWNY 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0572 234 FunFam Ethylene-responsive transcription factor 2 63 122 - -
Mibi05g0572 234 MobiDBLite consensus disorder prediction 31 46 - -
Mibi05g0572 234 MobiDBLite consensus disorder prediction 1 22 - -
Mibi05g0572 234 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Mibi05g0572 234 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Mibi05g0572 234 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Mibi05g0572 234 CDD AP2 65 123 IPR001471 GO:0003700|GO:0006355
Mibi05g0572 234 MobiDBLite consensus disorder prediction 1 61 - -
Mibi05g0572 234 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Mibi05g0572 234 SUPERFAMILY DNA-binding domain 64 122 IPR016177 GO:0003677
Mibi05g0572 234 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 24 191 - -
Mibi05g0572 234 MobiDBLite consensus disorder prediction 47 61 - -
Mibi05g0572 234 Pfam AP2 domain 63 113 IPR001471 GO:0003700|GO:0006355
Mibi05g0572 234 Gene3D AP2/ERF domain 64 122 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0572 Mibi-ChrMibi05 5529464 5530168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0572 39 226 AP2-EREBP Transcription Factor Family AT5G11590 65.657 1.51e-76 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi05g0572 AP2 2.6e-14 CL0081