Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0567 ATGGCTTCTTCTTCCATTTCCCCCAACCCTCCCTTCTCCGACCGAATCCTCCGTGCCCTCCGCCACCCACTCCTCCTCCTCCACCGCAACCACTCCTCCTTCTTCATCTTAGGCGCCACCGCCAACGTCTACACCGTCACTCTCTCCTCCCTCCCTTCCTGTACTTGCCCTGACCGTACATCCCCCTGCAAGCACATCCTCTTCGTCTTCATCCGTGTCCTCGGCCTCCCTCTCCACCACCCCTCCCTCCGCCGCCGTACCCTCCGCCCCTCCCTACTCCGCCGCCTCCTCGACCTCCCCACCTCGCCGGAATCCCTCGCCGGAGATTCCCTCCGCCAGAGTTTCCACCAGCTTTTCTTCGCCTCCAGGCAGGACATCACTGTTGAGGTGGAGGATGGGGCTTCGTGTCCCATTTGTCTTGAAGAAATGGGGAAGGATGAGAGGGTTATTGTTGCTTGTGGAAGTTGTAGGAATGCGATTCATGAGGAGTGTTTTGTGACGTGGAAGAGGAGTAGGGGTAGGAGGATGGCTAGTTGTGTCATTTGTAGGGCTAGATGGAGAGGAATGAATGATCAAGATCAGTACTTGAATCTCTCTGCTTATGTTGGTCACAATGATTTGGCTGAGTCCAGTGCAGGTCCCTGCGCTGCTTAA 654 0.5657 MASSSISPNPPFSDRILRALRHPLLLLHRNHSSFFILGATANVYTVTLSSLPSCTCPDRTSPCKHILFVFIRVLGLPLHHPSLRRRTLRPSLLRRLLDLPTSPESLAGDSLRQSFHQLFFASRQDITVEVEDGASCPICLEEMGKDERVIVACGSCRNAIHEECFVTWKRSRGRRMASCVICRARWRGMNDQDQYLNLSAYVGHNDLAESSAGPCAA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0567 217 ProSiteProfiles Zinc finger RING-type profile. 136 183 IPR001841 -
Mibi05g0567 217 Pfam Ring finger domain 135 183 IPR001841 -
Mibi05g0567 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 121 200 IPR013083 -
Mibi05g0567 217 ProSiteProfiles Zinc finger SWIM-type profile. 44 74 IPR007527 GO:0008270
Mibi05g0567 217 Pfam SWIM zinc finger 44 72 IPR007527 GO:0008270
Mibi05g0567 217 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 8 189 IPR039903 GO:0061630
Mibi05g0567 217 SUPERFAMILY RING/U-box 128 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0567 Mibi-ChrMibi05 5464828 5465481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0567 131 207 C3H Transcription Factor Family AT3G58720 31.707 4.27e-06 44.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0567 05 5464828 5465481 Mibi05g0567 05 5464828 5465481 ECH