Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0561 ATGATGGCAGTGAGTTCTGGTTGTAAAGAGGCGAGTAAGGTGAGCATGGACAATGGCAAGTATGTGAGGTATACGCCAGAGCAGGTTGAAGCTTTGGAGAGGCTTTATCATGAATGCCCTAAGCCCAGTTCCATGCGTCGCCAACAGCTCATCAGAGAATGCCCCATTCTCTCTAATATCGAGCCCAAGCAGATCAAGGTTTGGTTCCAGAATCGAAGGTGTAGAGAGAAGCAGAGGAAGGAATCTTTTCGCCTGCAAGCGGTGAACAGGAAACTGACGGCCATGAATAAACTACTGATGGAGGAAAATGAGAGATTGCAGAAGCAAGTTTCACGGCTGGTTTATGAGAACAGCTTTTTCCGCCAACAGACACAGAATGCGACCCTTGCTACGACGGACACAAGTTGTGAGTCGGTGGTAACGAGCGGTCAGCACCATGTGACACCTCAGCATCCACCAAGGGATGCCAGCCCTGCTGGACTATTGTCCATTGCAGAAGAAACCTTAGCAGAGTTTCTTTCAAAGGCCACTGGAACTGCCGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATAGGAATCGTTGCTATTTCTCATGATTGCCCTGGAGTGGCAGCACGAGCCTGCGGCCTTGTGGGTCTTGAACCTACGAGGGTTGCGGAAATACTCAAAGATAGGCCCTCTTGGTTTCATGATTGCCGAACCTTGGATGTTCTGAATGTGATGCCCACTGGAAATGGGGGAACCATTGAAATGCTTTACATGCAGTTGTATTCGCCAACAACTTTAGCTCCTGCTCGTGACTTTTGGTTGCTGCGCTACACATCGGTTTTGGAGGACGGCAGTCTGGTGGTCTGTGAAAGATCACTTAACAACACCCAGAATGGACCTACAGTGCCCCCAGTACAGCACTTTGTTAGGGCAGACATGCTGCCTAGCGGGTATCTGATTAGACCTTGTGAAGGAGGTGGATCCATCATTCGTATTGTTGATCATATGGAGTTAGAGCCCTGGAGTGTTCCTGAAGTGTTGCGCCCACTTTACGAGTCATCAACGCTACATGCTCAAAAGACAACAATGGCGGCCTTACGTCATTTGAGACAGATCTCTCAAGAAGCTTCTCAACCAAATGTCTCTGGATGGGGAAGAAGGCCTTCTGCTTTACGTGCACTTAGCCAGCGATTGAGCAAGGGATTCAATGAAGCTGTCAATGGGTTTGCTGACGATGGCTGGTCCATGTTAGAAAGTGACGGCATTGATGATGTCACCCTTCTGGTGAATTCATCTCCCAACAAGATGGTGGGTGTAAATTTTGTTCAGAGCAATGGATTTCCTTATATGAGCAGTTCCGTGCTGTGTGCCAAAGCATCCATGCTGTTACAGAATGTCCCTCCAGCAATTCTTCTCAGATTCCTGCGGGAGCACCGATCAGAGTGGGCGGATAGCAGTATTGATGCTTACTCAGCTGCTGCCATCAAAGCTGCTCCCTGTAGCTTGCCTGGAACCCTAACAGGAAGTTTTGGGGGTCAATTCATGGAGGTCATTAAGCTTGAAAACATGGGTTACTATAGGGATGACATGATTATACCTGAGGATGTTTTTCTTTTGCAACTTTGTAATGGAGCAGATGAGCAGGCAAATGGTACCTATGCAGAACTCATTTTCGCTCCTATTGATGCATCTTTTTCTGACGATGCACCTATTTTACCTTCTGGTTTTCGCATCATAGCTCTCAATTCTAACAGAGAAGTTGCAAGTTCAAATCGTACACTTGATCTTGCTTCTGCTCTAGAAGTTAAAACCACAGCAAACAAAGCTAGCAGTGACAATAATGGTAACACAAAATCTGTGATGACAATGGCATTCCAGTTTGCATTTGAAGTCCACCTTCAGGATAGTGTAGCCTCTATGGCCCGGCAGTACGTGCGCAGTATTATTGCATCGGTTCAGAGGGTTGCATTAGCACTCTCTCCTTTGCACTTTGGTTCCCGTAATGGTTTGCAAGCTCCATCTGGCCCTCCTGAGGCACATACACTTGCTCGTTGGATCTGTCAAAGCCATAGATGCTATCTTGGGGTAGAACTGCTAAAATGTGAAGGCAGTGAATCCATTCTCAAATCCCTTTGGCATCACTCAGATGCTGTCCTGTGCTGCTCGTTAAAGGCATTACCGACCTTCACATTTGCTAATCAAGCTGGCCTTGACATGCTTGAGACAACTTTGGTGGCTCTTCAAGACATCACTCTGGAAAAAATCTTTGACGACACTGGAAAGAAAACCCTTTTCTCTGAGTTCCCTCATATAATGCAGCAGGGTTTTATGTGCATGCAAGGTGGCATCTGCGTTTCCAGCATGGGAAGACCAGTGTCGTATGAAAGAGCAGTGGCATGGAAAGTGTCGAACGAAGAAGAAGTGGCCCAATGCATATGTTTCATGTTCATCAACTGGTCTTTTGTCTAA 2472 0.4717 MMAVSSGCKEASKVSMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESFRLQAVNRKLTAMNKLLMEENERLQKQVSRLVYENSFFRQQTQNATLATTDTSCESVVTSGQHHVTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHDCPGVAARACGLVGLEPTRVAEILKDRPSWFHDCRTLDVLNVMPTGNGGTIEMLYMQLYSPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPTVPPVQHFVRADMLPSGYLIRPCEGGGSIIRIVDHMELEPWSVPEVLRPLYESSTLHAQKTTMAALRHLRQISQEASQPNVSGWGRRPSALRALSQRLSKGFNEAVNGFADDGWSMLESDGIDDVTLLVNSSPNKMVGVNFVQSNGFPYMSSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSSIDAYSAAAIKAAPCSLPGTLTGSFGGQFMEVIKLENMGYYRDDMIIPEDVFLLQLCNGADEQANGTYAELIFAPIDASFSDDAPILPSGFRIIALNSNREVASSNRTLDLASALEVKTTANKASSDNNGNTKSVMTMAFQFAFEVHLQDSVASMARQYVRSIIASVQRVALALSPLHFGSRNGLQAPSGPPEAHTLARWICQSHRCYLGVELLKCEGSESILKSLWHHSDAVLCCSLKALPTFTFANQAGLDMLETTLVALQDITLEKIFDDTGKKTLFSEFPHIMQQGFMCMQGGICVSSMGRPVSYERAVAWKVSNEEEVAQCICFMFINWSFV 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0561 823 ProSiteProfiles START domain profile. 154 368 IPR002913 GO:0008289
Mibi05g0561 823 SMART HOX_1 17 83 IPR001356 GO:0003677
Mibi05g0561 823 Pfam MEKHLA domain 682 822 IPR013978 -
Mibi05g0561 823 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 16 823 IPR044830 GO:0003700
Mibi05g0561 823 Pfam START domain 164 372 IPR002913 GO:0008289
Mibi05g0561 823 Coils Coil 85 116 - -
Mibi05g0561 823 SUPERFAMILY Homeodomain-like 19 81 IPR009057 -
Mibi05g0561 823 Gene3D - 12 84 - -
Mibi05g0561 823 Pfam Homeodomain 20 78 IPR001356 GO:0003677
Mibi05g0561 823 CDD START_ArGLABRA2_like 158 373 - -
Mibi05g0561 823 CDD bZIP 72 111 - -
Mibi05g0561 823 FunFam Homeobox-leucine zipper protein REVOLUTA 20 75 - -
Mibi05g0561 823 Gene3D - 194 379 IPR023393 -
Mibi05g0561 823 ProSiteProfiles 'Homeobox' domain profile. 15 79 IPR001356 GO:0003677
Mibi05g0561 823 SUPERFAMILY Bet v1-like 163 375 - -
Mibi05g0561 823 CDD homeodomain 20 80 IPR001356 GO:0003677
Mibi05g0561 823 SMART START_1 163 373 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0561 Mibi-ChrMibi05 5429090 5434685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0561 15 823 Homeobox Transcription Factor Family AT4G32880 77.482 0.0 1324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi05g0561 START 1.5e-50 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0561 05 5429090 5434685 Mibi05g0561 05 5429090 5434685 ECH