Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0548 ATGCCTTCTTCCCGGCAAATTTCCAAACCTCACCCTCACCAACAAACTGAAACATCTCAAATATCCAGAAGTCCTCAACTTGTTTCCACTTTTCGATTGCTTTTCTTCTTCTTCTTCTTCCTCAGCTTCTCAGTGATCTCTAGAGCAAATTCGCGAACCCTAGGTACGGAACAGAGCATCTTGCTCAATGTTAAACATCAACTAGGCGATCCACCGTCGCTTCGATCGTGGACCTCATCATCCTCGCCGTGCGATTGGCCGGAGATAAGTTGCGCCGACGGCGGCGTTACTCAGGTCCTTCTCTCCGGGAAAGGTATCTCCCGGAAGTTACCGCCGGCGATCTGCGACCTCAAGAATCTGGTGAAGCTCGATCTCTCGAACAACAACGTTGACGGAGAATTCCCGAGGTTTTTGTACAATTGCTCCAAATTACAATTTCTTGGCCTCTCTCAAAATTACTTCGCTGGCTCAATCCCTGACGATATTGATAGACTCAAAACTCTGACGTTCTTAGATCTTAGTGGCAACTATTTTTCTGGTGATGTACCGGAAGCCGTGGGGAGATTATCGGAGTTGCGAGCTTTGTACCTCCACGGCAACGAATTCAATGGAACTTTTCCAAAGGAAATTGGGAGGTTATCGCATCTCGAAATCCTCAGTTTGGCCTATAACGACAAATTTGTGCCCGTAAAAATCCCATTGGAGTTTGGGAACTTGAGGAATTTAACGTTCATGTGGATGACAAGCTGCAATTTAGTCGGTGAAATTCCTGAAAGTTTTGCCAATCTTACGAATATCGTGAAATTGGATTTGTCATTGAACAATTTGACAGGCAGAATTCCCAGTAGTTTGTTCTCTCTCAAGAATTTACAATTTCTTTACCTGTACCACAACAGATTGTCTGGTGAAATACCTAGTTCGATCCGGGCCTTGAATTTGGTTCACGTTGATTTGGCCATGAACAATTTCACGGGTCCGATTCCTGAAGAGTTTGGGAAGTTGGAGAACTTGACGATACTTAGCCTGTATTACAATCAATTATCTGGTCAGATTCCGAGGAGTTTAGGCCTAATCAAAACGCTGGAGCACTTCAAGGTCTTTAGCAATAAGTTGAATGGAACTCTTCCTCCAGAATTAGGCCTATATTCAAAGCTTGAAGTGTTTGAAGTCGCAGACAATCAACTGAGTGGTGTGTTGCCTCAATATTTGTGTGCCAATAATGCTTTGCTAGGTGTGATTGCTTTTTCTAACAATCTTGGTGGGAAATTGCCTGAATCTCTTGGAAATTGCACTACACTGCGCACAGTTCAGCTTTACGGGAACTATTTTTCAGGTGAGATTCCTGTAAGTCTTTGGACTTCCAAGAATTTATCAACCTTGATGTTGAGCGAGAACTCGTTTTCTGGTCAACTTCCTAGTGAACTTCCATGGAATATGTCGAGGCTAGAGGTCAGAAATAACAACTTTTCAGGAGAGATTTCGGCTGGAATTGTTTCAGCAGTCAATCTAGTAGTATTTGATGCGAGAAACAATATGCTTTCTGGTGAAATTCCCAAGAAGTTGACAGCTCTTTCCAGACTTAATTCTCTCAGGCTTGACAATAATCAACTGTCCGGTGAACTAGCATCAGAGATAGTATCCTGGAAATCCCTAAATACATTAACACTCTCGAGCAACAAACTCTCTGGGCGAATTCCGGGAGCTATAGGTGATCTCCCTAATCTTGTTGACCTGGACTTGTCTGAAAATGATATATCTGGTGAAATCCCACCTCAGCTTGGCAGTATGAGGCTAGTTTTTCTCAACTTGTCCTCCAACAACCTTTCTGGTAGCATCCCAGATGCTTTCAATAACCTCGCATACGACACTAGTTTCTTGAACAGTCCTAATCTCTGTGCTTATAGTTCAAAAATCAAACTTCCAAAATGCTTGACCAAAACTCCTCCATATCCAAACAAATCATCCTTCAAGTTGCTTGCCTTGATTATTGTTCTTGCAATCATTGTGTTGCTAGCCGCTGCCTCACTGACCATCTATAAGTTCAAAGGCATGTCAGGAAAGAATTCCAAGCGCAATATTTCAACGTGGAAGCTTATTTCATTCCAGAGGCTAGATTTCTCAGAATGGAATCTCTTCTCAAACCTGACAGATGATAACCTCATTGGAAGCGGGGGATTTGGGGAAGTTTACCGGGTTCCCTCTAATCGCTCGGGTGAGTATGTTGCGGTAAAAAGGATTTGGAACAGCAAAAGGTTGGGTGATAATCTAGAGAAAGACTTTATGTCTGAAGCTGAAATCCTAGGCACAATTAGGCATTCTAATATTGTGAAGCTTATGTGCTACATTTCAAGCGAAAACTCAAAACTCCTGGTGTATGAATACAAGGAAAATTGTAGCCTTGATAGATGGCTTCATGGAAAGAGAAAAGCATCAACTACACCTAACAATCATCTGGTCTTGAAGTGGCCAACAAGGTTGAAAATTGCCATTGGGGCCGCACAAGGATTGTGTTACATGCACCACGATTGCTCCCCACCAATCATCCATAGAGACATAAAATGTAGCAATATATTACTGGACTCCGAATTCCGGGCAAGTATTGCAGACTTTGGGCTAGCGAGGATATTGGCGAAATCTGGGGAGCAACATAGTCTATCTACCATAGCGGGATCTTTCGGCTACATACCCCCAGAATATGCCTACTCAACCAAGATCAACGAGAAAGCGGATATATATAGTTTTGGGGTGGTACTACTGGAGCTTGTAACAGGAAAAGAACCCTATAGCGTGGATGAACAGACAAGCCTAGTAGATTGGGCATGGCAATATCACGATGAAGAGAAGTGCCTTGCTGACGTCTTGGACGAAGAAATCAAAGAAGCATGTCATGTACAGGTGATGATAAAGGTATTTAAATTAGGCCTAGCTTGCACAAGCTTAACACCCTCAACTAGACCTTCTATGAGAGAGATTTTGCGAGTTCTTCAGCAGTGTTGTCCGCCAGATCATGGTGTTAAGACGATAAGAACTGAGTTTGATATTGCTCCCCTTCTTGGGGATACCACGTACATTTCAAATTACAAGGATAGTAGCACGGCTATAGGTGATAGTGATGAAAGTTACTAG 3126 0.429 MPSSRQISKPHPHQQTETSQISRSPQLVSTFRLLFFFFFFLSFSVISRANSRTLGTEQSILLNVKHQLGDPPSLRSWTSSSSPCDWPEISCADGGVTQVLLSGKGISRKLPPAICDLKNLVKLDLSNNNVDGEFPRFLYNCSKLQFLGLSQNYFAGSIPDDIDRLKTLTFLDLSGNYFSGDVPEAVGRLSELRALYLHGNEFNGTFPKEIGRLSHLEILSLAYNDKFVPVKIPLEFGNLRNLTFMWMTSCNLVGEIPESFANLTNIVKLDLSLNNLTGRIPSSLFSLKNLQFLYLYHNRLSGEIPSSIRALNLVHVDLAMNNFTGPIPEEFGKLENLTILSLYYNQLSGQIPRSLGLIKTLEHFKVFSNKLNGTLPPELGLYSKLEVFEVADNQLSGVLPQYLCANNALLGVIAFSNNLGGKLPESLGNCTTLRTVQLYGNYFSGEIPVSLWTSKNLSTLMLSENSFSGQLPSELPWNMSRLEVRNNNFSGEISAGIVSAVNLVVFDARNNMLSGEIPKKLTALSRLNSLRLDNNQLSGELASEIVSWKSLNTLTLSSNKLSGRIPGAIGDLPNLVDLDLSENDISGEIPPQLGSMRLVFLNLSSNNLSGSIPDAFNNLAYDTSFLNSPNLCAYSSKIKLPKCLTKTPPYPNKSSFKLLALIIVLAIIVLLAAASLTIYKFKGMSGKNSKRNISTWKLISFQRLDFSEWNLFSNLTDDNLIGSGGFGEVYRVPSNRSGEYVAVKRIWNSKRLGDNLEKDFMSEAEILGTIRHSNIVKLMCYISSENSKLLVYEYKENCSLDRWLHGKRKASTTPNNHLVLKWPTRLKIAIGAAQGLCYMHHDCSPPIIHRDIKCSNILLDSEFRASIADFGLARILAKSGEQHSLSTIAGSFGYIPPEYAYSTKINEKADIYSFGVVLLELVTGKEPYSVDEQTSLVDWAWQYHDEEKCLADVLDEEIKEACHVQVMIKVFKLGLACTSLTPSTRPSMREILRVLQQCCPPDHGVKTIRTEFDIAPLLGDTTYISNYKDSSTAIGDSDESY 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0548 1041 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Mibi05g0548 1041 SUPERFAMILY Protein kinase-like (PK-like) 705 995 IPR011009 -
Mibi05g0548 1041 Pfam Protein kinase domain 717 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0548 1041 Gene3D Transferase(Phosphotransferase) domain 1 796 1007 - -
Mibi05g0548 1041 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 207 304 - -
Mibi05g0548 1041 Gene3D Phosphorylase Kinase; domain 1 698 794 - -
Mibi05g0548 1041 SUPERFAMILY RNI-like 311 626 - -
Mibi05g0548 1041 Gene3D Ribonuclease Inhibitor 312 355 IPR032675 -
Mibi05g0548 1041 Gene3D Ribonuclease Inhibitor 229 311 IPR032675 -
Mibi05g0548 1041 FunFam Receptor-like protein kinase HSL1 isoform A 55 204 - -
Mibi05g0548 1041 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Mibi05g0548 1041 Gene3D Ribonuclease Inhibitor 356 479 IPR032675 -
Mibi05g0548 1041 Gene3D Ribonuclease Inhibitor 480 661 IPR032675 -
Mibi05g0548 1041 SMART serkin_6 715 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0548 1041 MobiDBLite consensus disorder prediction 1 21 - -
Mibi05g0548 1041 FunFam Kinase family with leucine-rich repeat domain-containing protein 697 794 - -
Mibi05g0548 1041 FunFam Kinase family with leucine-rich repeat domain-containing protein 795 1011 - -
Mibi05g0548 1041 SMART LRR_typ_2 572 596 IPR003591 -
Mibi05g0548 1041 SMART LRR_typ_2 287 311 IPR003591 -
Mibi05g0548 1041 SMART LRR_typ_2 524 548 IPR003591 -
Mibi05g0548 1041 SMART LRR_typ_2 334 358 IPR003591 -
Mibi05g0548 1041 SMART LRR_typ_2 189 213 IPR003591 -
Mibi05g0548 1041 SMART LRR_typ_2 117 141 IPR003591 -
Mibi05g0548 1041 FunFam Leucine-rich repeat receptor-like protein kinase TDR 331 645 - -
Mibi05g0548 1041 Pfam Leucine rich repeat N-terminal domain 58 91 IPR013210 -
Mibi05g0548 1041 ProSiteProfiles Protein kinase domain profile. 715 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0548 1041 SUPERFAMILY L domain-like 65 418 - -
Mibi05g0548 1041 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 232 990 - -
Mibi05g0548 1041 Pfam Leucine rich repeat 119 177 IPR001611 GO:0005515
Mibi05g0548 1041 Pfam Leucine rich repeat 525 585 IPR001611 GO:0005515
Mibi05g0548 1041 Pfam Leucine rich repeat 250 300 IPR001611 GO:0005515
Mibi05g0548 1041 Gene3D Ribonuclease Inhibitor 54 228 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0548 Mibi-ChrMibi05 5285803 5289013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0548 57 1018 Receptor kinase-like Gene Family AT5G25930 54.855 0.0 1039
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi05g0548 Pkinase 2.8e-46 CL0016