Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0534 ATGGATAGTAAAACCATTTTCTTTCTTCTTGTTTTCTCCATGTCTTGTATTCCATTGGTCTTCAGTATTATAAACACCAATCAATCTCAGTTTTTTGTTCTCATGAAGAAGTCTTTCTCCGGTAAGTACCCATCCAGTTGGGACGTCACCGGAGGAAAATCTGTTTGCACCTTCACTGGCGTTGGCTGCAACCACCAAGGTGATGTCGTCAGCCTTGATGTCTCGGGCTGGTCACTCTCTGGTGACTTCCCTAAAAATATATGCTCTTACTTGCCTGAGCTACGTGTTCTTCGTCTCAGCAATAACAGAATCAAAGGAAACCTCTTTCCTGATACCATAGTCAATTGTTCCCACTTGGAAGAACTTACCATGAGTTATATGCTTCTTTCCGGAAACCTTCCTGATATTTCACCTCTTCAGACATCTCTCAAGGTTCTTGATTTGTCTTATAACGTTTTCACTGGTTGGTTTCCCATGTCAGTGTTTAATCTCTCCAGCTTAGAGGTCCTTAACTTCAACGAAAATGAAGGCTTCAACTTCTGGAAGCTTCCAGAGGATGTTTCCAACCTCAAAAATCTCAAGACTATGGTGCTCACAACATGCATGGTGCAAGGTCAAATTCCAGCATCTTTAGGGAACCTTACGTCTCTTGTTGATCTTGAGTTGAGTGGAAATTTCCTCACGGGTAAAATTCCTCCAGAGCTTGGAATGCTGAAGAATCTGCAATATCTTGAGCTTTATTATAACAGTCTTGTTGGTGATATACCTGAGGAGCTAGGAAATCTCATGGAGCTCAAAGACTTTGACTTGTCAGTCAACAAGTTGACTGGGAAAATCCCAGAATCTATATGCCGCCTTCCCAAGCTTGAAGTGATACAGCTTTACAATAATAGCCTCTCAGGAGAAATCCCAGCTGTGATCGCAAACTCAACATCCTTGAAAATATTGTCTATTTATGACAATTTTCTGGGTGGTCATGTCCCAAGAAATCTTGGTCAGTTCTCAGAATTGGTTGCTTTAGACATGTCTGAAAACCAACTTTCTGGTCCTTTGCCAACAGAGGTTTGCAGGGGAGGTAAACTGCTCTATTTTCTTGTTCTGGATAATCAGTTCTCTGGTGAGCTGCCTGAAGTTTATGCAAAATGTTGGACTCTTTTGAGGTTCAGAGTGAGCAATAATCATTTGCAGGGCTCAGTTCCTGAGAATATCTTTGGCTTGCCACATGTTTCAATAATTGATTTGGGATACAATAATTTCTCTGGTTCCATTTCCCAGTCTATTGGAAATTCTAGAAACTTGTCAGAGCTTTTCCTGCAGAAGAACAAGATTTCTGGATCAATTCCTCCTACCATCTCTCGGGCCACCAATCTGGTCAAGATTGATCTCAGTTACAACCTTCTTTCTGGTTCAATACCTTCAGAAATTGGAGAGCTGAAGAGGCTTAATTCACTGATGCTGCAAGGAAATAAGCTAAGTTCTTCCATTCCCACCTCACTTTCCTTATTGCAGTCCCTAAACGTTCTTGATCTCTCAAACAACCTGTTGAGTGGGACCATCTCTGATTCCCTATCTGCACTCTTACCAAACTATATCAATTTCTCAAACAATTTGCTTTCTGGTCCAATTCCTTCCTCATTGATGAAAGGAGGCCTATTAGAAAGCTTTTCAGGGAATCCTGGCCTCTGCGTGTTGCCTGTTTATGCCAACTCATCATACCAGAATTTCCATGTGTGTCCCCAAAGTAGCAGCAAAAAAAGGCCAAGTGTCATATGGGTAGGTGCAATTGCAGTAGCTTTGATCATCATTGGATTTGGAGCTATATTGGTCATAAGACGTAGGCCTACCAAAGATAAGTCAACCATGGAACAAGATGAAGAGTCACTATCTTCTTCATTCTTCTCCTATGACTTGAAGAGCTTCCACAAATTAAATTATGATAGGCAGGAGATCATTGAGGCCATGGTGGATAAGAACATAGTGGGATACGGTGGATCAGGGACAGTGTACAAGATTGAGTTGAAAAGTGGTGAACTTGTTGCAGTCAAGAAATTATGGAGTCGAACATCCAAGGAATCGGCTCAAGAGGATCGAATGGTGCTGGACAGGGAGTTGAAAAATGAGGTTGAAACCTTAGGAAATATAAGACACAAGAACATAGTTAAACTGTACAGCTACTTCACCAGCTTTGACTTCAGCTTGTTGGTATATGAGTACATGCCAAATGGTAATCTTTGGGATGCCCTACACAAAAGTTGGATCAACTTGACTTGGCCTACACGTCATCAGATCGCACTAGGGGTAGCACAGGGTTTAGCATACCTCCACCATGATCTTCTTCCTCCAATTATTCACAGAGACATCAAGTCTACTAACATCCTTCTGGATGCTCATTACCAGCCCAAGGTTGCAGATTTCGGAATCGCTAAGGTTTTACAAGCAAGAGGAGGCAAAGATTCCACCACAACTGTAATTGCAGGAACCTATGGTTACTTAGCCCCAGAATATGCATATTCATCAAGAGCAACAACCAAGTGTGATGTCTATAGTTTTGGCGTGATTCTTATGGAACTGATAACTGGGAAGAAGCCTGTTGAGGCAGAGTTCGGAGAGAACAGGAATATAGTATATTGGGTTTCAAACAAGGTGGACAGCAAGGAAGGGATTAATGAGATAATAGACAAAAGGTTATCATCAGGTTTATTCAGGGAGGAAATTATTCAAATGATCCGAATTGCTATTAAGTGCACCTACAAATCTCCTGCTAATAGACCAACCATGAAAGAGGTGGTTCAGCGACTCATTGAAGCAGATCCATGCAAATACGATTCTGGCAAGTTGCCAGACAAGACTAGTACCAATAAAATATGA 2868 0.4156 MDSKTIFFLLVFSMSCIPLVFSIINTNQSQFFVLMKKSFSGKYPSSWDVTGGKSVCTFTGVGCNHQGDVVSLDVSGWSLSGDFPKNICSYLPELRVLRLSNNRIKGNLFPDTIVNCSHLEELTMSYMLLSGNLPDISPLQTSLKVLDLSYNVFTGWFPMSVFNLSSLEVLNFNENEGFNFWKLPEDVSNLKNLKTMVLTTCMVQGQIPASLGNLTSLVDLELSGNFLTGKIPPELGMLKNLQYLELYYNSLVGDIPEELGNLMELKDFDLSVNKLTGKIPESICRLPKLEVIQLYNNSLSGEIPAVIANSTSLKILSIYDNFLGGHVPRNLGQFSELVALDMSENQLSGPLPTEVCRGGKLLYFLVLDNQFSGELPEVYAKCWTLLRFRVSNNHLQGSVPENIFGLPHVSIIDLGYNNFSGSISQSIGNSRNLSELFLQKNKISGSIPPTISRATNLVKIDLSYNLLSGSIPSEIGELKRLNSLMLQGNKLSSSIPTSLSLLQSLNVLDLSNNLLSGTISDSLSALLPNYINFSNNLLSGPIPSSLMKGGLLESFSGNPGLCVLPVYANSSYQNFHVCPQSSSKKRPSVIWVGAIAVALIIIGFGAILVIRRRPTKDKSTMEQDEESLSSSFFSYDLKSFHKLNYDRQEIIEAMVDKNIVGYGGSGTVYKIELKSGELVAVKKLWSRTSKESAQEDRMVLDRELKNEVETLGNIRHKNIVKLYSYFTSFDFSLLVYEYMPNGNLWDALHKSWINLTWPTRHQIALGVAQGLAYLHHDLLPPIIHRDIKSTNILLDAHYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSRATTKCDVYSFGVILMELITGKKPVEAEFGENRNIVYWVSNKVDSKEGINEIIDKRLSSGLFREEIIQMIRIAIKCTYKSPANRPTMKEVVQRLIEADPCKYDSGKLPDKTSTNKI 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0534 955 FunFam receptor protein-tyrosine kinase CEPR1 637 738 - -
Mibi05g0534 955 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 26 180 - -
Mibi05g0534 955 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 739 951 - -
Mibi05g0534 955 FunFam Receptor protein-tyrosine kinase CEPR1 286 572 - -
Mibi05g0534 955 Gene3D Phosphorylase Kinase; domain 1 637 738 - -
Mibi05g0534 955 Gene3D Ribonuclease Inhibitor 26 178 IPR032675 -
Mibi05g0534 955 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Mibi05g0534 955 ProSitePatterns Protein kinases ATP-binding region signature. 660 683 IPR017441 GO:0005524
Mibi05g0534 955 PRINTS Leucine-rich repeat signature 337 350 - -
Mibi05g0534 955 PRINTS Leucine-rich repeat signature 502 515 - -
Mibi05g0534 955 Gene3D Ribonuclease Inhibitor 297 572 IPR032675 -
Mibi05g0534 955 SMART serkin_6 654 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0534 955 PANTHER LEUCINE RICH REPEAT KINASE 2 211 938 - -
Mibi05g0534 955 CDD STKc_IRAK 660 935 - -
Mibi05g0534 955 Gene3D Ribonuclease Inhibitor 179 296 IPR032675 -
Mibi05g0534 955 SMART LRR_typ_2 91 116 IPR003591 -
Mibi05g0534 955 SMART LRR_typ_2 502 526 IPR003591 -
Mibi05g0534 955 SMART LRR_typ_2 164 190 IPR003591 -
Mibi05g0534 955 SMART LRR_typ_2 478 501 IPR003591 -
Mibi05g0534 955 SMART LRR_typ_2 334 358 IPR003591 -
Mibi05g0534 955 SMART LRR_typ_2 238 262 IPR003591 -
Mibi05g0534 955 SMART LRR_typ_2 214 237 IPR003591 -
Mibi05g0534 955 SMART LRR_typ_2 286 310 IPR003591 -
Mibi05g0534 955 Pfam Protein kinase domain 656 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0534 955 FunFam Leucine-rich repeat receptor-like protein kinase 181 282 - -
Mibi05g0534 955 ProSiteProfiles Protein kinase domain profile. 654 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0534 955 SUPERFAMILY RNI-like 255 570 - -
Mibi05g0534 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Mibi05g0534 955 SUPERFAMILY RNI-like 68 348 - -
Mibi05g0534 955 Gene3D Transferase(Phosphotransferase) domain 1 739 945 - -
Mibi05g0534 955 SUPERFAMILY Protein kinase-like (PK-like) 656 933 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0534 Mibi-ChrMibi05 5179911 5182957 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0534 28 938 Receptor kinase-like Gene Family AT5G49660 64.153 0.0 1169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi05g0534 Pkinase 4e-50 CL0016