Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0533 ATGTCTAACAGGTTAATAGGATTTTACATGGCTATGCAAACTATAGAGCCTCCCTTCTTTTGCCTCAAGTTTCTTCAGTTCACACCCTATTTCTCAATCATGTCTCCTTCCTTGCGTCCTCCATCCTCCAACATGTTCCTCTCTCTCTTCTATCTCTTCTTTCTCACTTCCTTCTTCTCCGGTGTTCATTCCGGCGACCGTCAACTCCTTCTCAACTTGAAATCCTCCCTCATGAATGAGTCAAACTCCCCTGTTTTTGACTCATGGAATTCCACCTTCCCTTTCTGCAATTTCTACGGTATCACCTGTAACTCCAAAGGTTCTGTTACGGAAATCGATCTTTCTTCTCAGAAACTATCTGGGGTTCTTACTTTTGATTCCATTTGCAAGCTTCCATCTTTACAGAAGCTCGCATTCGGGTTCAACTCCCTTCACGGCAGAGTCACAGAGGATTTGAGAAACTGTGTCAATTTGGTATATTTAGACTTGGGAAACAACGATTTCTCGGGGACGTTTCCTGATATATCTCCTCTGAACCAGTTGCAGTATCTGTTTTTGAACCAGAGTGGATTTTCTGGGACTTTCCCATGGAAGTCTCTGCTAAACATGACTCGTCTTGTGAGATTAAGCGTAGGAGATAACCCTTTTCAACTCACACCTTTTCCAAACGAGGTGGTCAATCTTAAAAGTCTCCAGTGGCTCTATCTATCGAATTGTAGCCTCGCAGGGGAAATACCTGTGGGAATAGGTAATCTCACTGAGCTTGTAAATTTTGAGTTTTCGGATAACTTTGTATCCGGTGAGATTCCTTCTGGGATTAGGAATCTTCAGAAGCTATGGCAGTTGGAGTTTTACAACAACTCCATAACTGGGAAATTTCCAATCGGGTTCAGAAATCTCACAAGCCTCGCGAAATTGGATGGGTCAATAAATCAACTTGAAGGAGATCTTTCCCAGTTAAGGTTCTTGACGAATCTGGTTTCTTTGCAATTATTTGAAAACAAGTTAACAGGGGAAATCCCACCTGAGTTCGGTGAATTCCAAAAACTCGTGAATCTCTCTCTGTACACCAATCAATTATCAGGGCCCATTCCTCAGAAACTTGGATCTTGGGCAGATTTTGATTTCATCGACGTGTCGGAGAACATGTTGACCGGTCCGATTCCACCTGATATGTGCAAAAAGGGAAAGATGCTTAGACTCCTCGTACTTCAGAACAAACTCTCCGGTGAAATACCAGCTACATATGCGAACTGCACGACTTTGGTTCGATTCAGAGTCAACGATAACTTGCTTTCCGGGAAGGTTCCTTCTGGAATATGGGGATTGCCAAACGCAGAGATAATCGACGTTGAACTGAATCAGTTGGAAGGTTCAATTACGTCAGATATCAAGAACGCGAAGGCCTTGGCCACTTTACTTGCTAAAAGGAACCGACTTTCCGGTGAGATACCAAAAGAAATTTCAGAAGCCACGTCTTTAGTGACAGTTGATCTGAGTGAGAATCAAATTTCAGGGGAAATTCCATTGGGTATTGGAGAACTGAAAAGTTTGAGCAGTCTTCATTTACAGAGGAATAGGTTATCTGGGTCTATACCCGATTCTTTGGGATCATGCACTTTCCTTAGTGATATGGAACTAGCAGAGAATTCACTCTCTGGAAATATCCCTTCATCTTTGGGTCATTTACCAGCTCTTAATGCGTTGAATTTGTCACAAAACGAACTCTCCGGTGAGATTCCGGCGAGTTTCACACTCCTACGGTTGAGCCTTTTTGATCTATCGAACAATCGATTAACAGGTCCGATCCCACAATCTCTATCCATTCAAGCTTTCAATGGAAGTCTTGATGGAAACCCAGGTCTTTGCACTCTTGACTCGATCAACTCTTTCAGGCCTTGCTCTTCTCATTCTGGCATACCCAGAAACGTCCGTACACTCATCATTTGCTTCACAATCACTTTGATCTTGCTTCTCGTTTGTTTGGCTCTTTACTTGAAGCTGAATAAGAAGGAGAAATATCGAGAGAGGTCTTTGAAGGAAGAATCATGGGACCTTAAATCCTTCCACGTGTTGAGTTTCACTGAGGACGAGATTCTGGATTCCATTAAGCAAGAGAATCTCATAGGGAAAGGAGGATCAGGAAACGTGTACAGAGTCCCACTATTGAATGGAAAAGAACTCGCCGTTAAGCACATATGGAATATGGATTCTGCTGGCCGGAGGAAGAGCCGGAGTAGTACTCCGATGATCGGGAAATATGATGAAGGCAAGTCAAAGTCAAAGGAATTTGATGCAGAGGTACAGACACTGAGCTCCATAAGACATGTGAACGTAGTGAAGCTTTACTGTAGCATCACAAGCGAGGATTCTAGCTTGCTGGTTTATGAGTATCTTCCGAATGGAAGCTTATGGGATCGACTTCACACAAATGGGAAGATGGAACTGGATTGGGAAATAAGATATGAAATTGCAGTTGGAGCTGCCAAGGGATTAGAGTATTTACATCATGGGTGTGAGAGACCGGTAATTCACAGAGACGTCAAATCTAGTAACATTTTATTGGATGAGTTCATGAAGCCTAGGATTGCTGATTTTGGACTTGCCAAGATTGTTCAGCCCAATGTTGGCCATGATTCTACTCAAGTCGTTGCAGGAACACATGGGTATATTGCTCCTGAATATGGGTACACATGTAAAGTGAACGAGAAAAGTGATGTGTACAGCTTTGGAGTGGTATTGATGGAGCTAGTAACGGGGAAGAAGCCGATAGAAGCAGAGTATGGGGAGAACAAAGACATAGTGAGCTGGGTGTGCAGCAAGATGCAGAGTGAAGAGAGGATAATGAGTGTGGTGGATTGTAGAATACAAGATATGTATAAAGATGAGGCTGTGAAGATGTTGAAGATAGCGATTCTGTGCACAGCAAGGCTTCCAGCTTTGAGGCCTACCATGAGAAGTGTGGTTCAAATGCTTGAGGATGCTGAGCCTTGTAAATTGGTCGGAATTGTCATCAGCAAAGATGGCTCTGAGAAGAAAATGCAGGACACTCACATGCCTAAGCTAAAGCCAAGTACTTGA 3081 0.4314 MSNRLIGFYMAMQTIEPPFFCLKFLQFTPYFSIMSPSLRPPSSNMFLSLFYLFFLTSFFSGVHSGDRQLLLNLKSSLMNESNSPVFDSWNSTFPFCNFYGITCNSKGSVTEIDLSSQKLSGVLTFDSICKLPSLQKLAFGFNSLHGRVTEDLRNCVNLVYLDLGNNDFSGTFPDISPLNQLQYLFLNQSGFSGTFPWKSLLNMTRLVRLSVGDNPFQLTPFPNEVVNLKSLQWLYLSNCSLAGEIPVGIGNLTELVNFEFSDNFVSGEIPSGIRNLQKLWQLEFYNNSITGKFPIGFRNLTSLAKLDGSINQLEGDLSQLRFLTNLVSLQLFENKLTGEIPPEFGEFQKLVNLSLYTNQLSGPIPQKLGSWADFDFIDVSENMLTGPIPPDMCKKGKMLRLLVLQNKLSGEIPATYANCTTLVRFRVNDNLLSGKVPSGIWGLPNAEIIDVELNQLEGSITSDIKNAKALATLLAKRNRLSGEIPKEISEATSLVTVDLSENQISGEIPLGIGELKSLSSLHLQRNRLSGSIPDSLGSCTFLSDMELAENSLSGNIPSSLGHLPALNALNLSQNELSGEIPASFTLLRLSLFDLSNNRLTGPIPQSLSIQAFNGSLDGNPGLCTLDSINSFRPCSSHSGIPRNVRTLIICFTITLILLLVCLALYLKLNKKEKYRERSLKEESWDLKSFHVLSFTEDEILDSIKQENLIGKGGSGNVYRVPLLNGKELAVKHIWNMDSAGRRKSRSSTPMIGKYDEGKSKSKEFDAEVQTLSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHTNGKMELDWEIRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFMKPRIADFGLAKIVQPNVGHDSTQVVAGTHGYIAPEYGYTCKVNEKSDVYSFGVVLMELVTGKKPIEAEYGENKDIVSWVCSKMQSEERIMSVVDCRIQDMYKDEAVKMLKIAILCTARLPALRPTMRSVVQMLEDAEPCKLVGIVISKDGSEKKMQDTHMPKLKPST 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0533 1026 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 249 993 - -
Mibi05g0533 1026 Gene3D Ribonuclease Inhibitor 176 395 IPR032675 -
Mibi05g0533 1026 FunFam Receptor-like protein kinase HAIKU2 686 798 - -
Mibi05g0533 1026 SMART serkin_6 703 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0533 1026 Gene3D Phosphorylase Kinase; domain 1 686 798 - -
Mibi05g0533 1026 Gene3D Transferase(Phosphotransferase) domain 1 799 1002 - -
Mibi05g0533 1026 Gene3D Ribonuclease Inhibitor 396 639 IPR032675 -
Mibi05g0533 1026 ProSiteProfiles Protein kinase domain profile. 703 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0533 1026 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 799 1007 - -
Mibi05g0533 1026 FunFam Leucine-rich receptor-like protein kinase family protein 223 319 - -
Mibi05g0533 1026 FunFam Leucine-rich repeat receptor-like protein kinase TDR 320 636 - -
Mibi05g0533 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Mibi05g0533 1026 SUPERFAMILY L domain-like 71 401 - -
Mibi05g0533 1026 Gene3D Ribonuclease Inhibitor 65 175 IPR032675 -
Mibi05g0533 1026 ProSitePatterns Protein kinases ATP-binding region signature. 709 731 IPR017441 GO:0005524
Mibi05g0533 1026 FunFam Probable inactive receptor kinase RLK902 63 222 - -
Mibi05g0533 1026 SUPERFAMILY Protein kinase-like (PK-like) 694 993 IPR011009 -
Mibi05g0533 1026 Pfam Leucine rich repeat N-terminal domain 64 104 IPR013210 -
Mibi05g0533 1026 Pfam Protein kinase domain 705 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0533 1026 SUPERFAMILY L domain-like 321 605 - -
Mibi05g0533 1026 SMART LRR_typ_2 228 252 IPR003591 -
Mibi05g0533 1026 SMART LRR_typ_2 515 539 IPR003591 -
Mibi05g0533 1026 SMART LRR_typ_2 586 614 IPR003591 -
Mibi05g0533 1026 SMART LRR_typ_2 323 347 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0533 Mibi-ChrMibi05 5170267 5173909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0533 34 1012 Receptor kinase-like Gene Family AT1G09970 63.618 0.0 1205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi05g0533 Pkinase 5.7e-43 CL0016