Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0526 ATGTCTACACTGCTGCTCGGCATAGGGGAGGACAAAGGTAAAAACGATGTCAATTTGTTGGCCTCCTCAACAACCATGGAAAGTGTTTGCCTCAATAGCTCCAAACTGAAAGAACGCAATTACATGGGATTATCTGATTCTTCTTCAGTGGACAGTTCAGCTCAGTCCTTCTCTGATGAGAGTAAAATTAGGCTAAACCTAAAAGCTACAGAGCTGAGGCTTGGCCTTCCTGGATCTCAGTCTCCTGAAAGAGAAGACTCAGATCGTCACTGCTTTGAAAGTTCAACTCAGTTTGATGAGAAACCTCTTTTCCCCTTGCACCCTTCAAAGAATGTTGTTTTGGGTAACAAAAGAGGGTTCTCAGATGCTATGAATGAGTTCTCCAAGGGTCGATTCCTAGCAAATTCGGAGGGGAATAGGATTTTGTCACCTAGACCCTCTCCTAATTTAGGATTGAAAACTAATTCTGTGCTTGAGAAAACCAAAGAAGCAGCACCAGCTAAGGTGGAACAGGAGAGCCCCCGTGTTGAGAACGAAACCAAACCAAACCATAATGTTTCTGCAAATAATAGTAGCACACCTGCTAATAAGGCACAGGTTGTGGGTTGGCCTCCTATTAGATCATTTAGGAAAAATTCATTGGCTACCACTATGAAAAATGCTGAAGAAGTAGATGGTAAAGCATTGTTTATCAAGGTCAGTATGGATGGTGCTCCATATTTGAGGAAAGTAGACCTGAAAAATTACAGTGCATATCCAGAACTATCTTCTTCTCTGGAGAAGATGTTCACTTGTTTTACCATAGGTCAATGTGGTTCTAACGGAACTCTGGGCAAGGGGATGTTGAATGAAAGCAAGGTGAGAGATCTGCTTCGAGGTTCTGAATTTGTTCTTACTTATGAGGACAAAGATGGTGACTGGATGCTTATGGGTGACGTTCCCTGGGAGATGTTTGTTGAAACATGCAGGAGGATGAGGATAATGAAGAGTTCTGAAGCCATTGGTTTAGCTCCCAGAAAGAAATAA 1026 0.424 MSTLLLGIGEDKGKNDVNLLASSTTMESVCLNSSKLKERNYMGLSDSSSVDSSAQSFSDESKIRLNLKATELRLGLPGSQSPEREDSDRHCFESSTQFDEKPLFPLHPSKNVVLGNKRGFSDAMNEFSKGRFLANSEGNRILSPRPSPNLGLKTNSVLEKTKEAAPAKVEQESPRVENETKPNHNVSANNSSTPANKAQVVGWPPIRSFRKNSLATTMKNAEEVDGKALFIKVSMDGAPYLRKVDLKNYSAYPELSSSLEKMFTCFTIGQCGSNGTLGKGMLNESKVRDLLRGSEFVLTYEDKDGDWMLMGDVPWEMFVETCRRMRIMKSSEAIGLAPRKK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0526 341 MobiDBLite consensus disorder prediction 75 104 - -
Mibi05g0526 341 FunFam Auxin-responsive protein 223 340 - -
Mibi05g0526 341 Pfam AUX/IAA family 70 339 IPR033389 -
Mibi05g0526 341 MobiDBLite consensus disorder prediction 160 198 - -
Mibi05g0526 341 SUPERFAMILY CAD & PB1 domains 225 329 - -
Mibi05g0526 341 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 65 335 IPR003311 GO:0005634|GO:0006355
Mibi05g0526 341 MobiDBLite consensus disorder prediction 82 96 - -
Mibi05g0526 341 MobiDBLite consensus disorder prediction 180 198 - -
Mibi05g0526 341 Gene3D - 222 340 - -
Mibi05g0526 341 MobiDBLite consensus disorder prediction 163 179 - -
Mibi05g0526 341 ProSiteProfiles PB1 domain profile. 228 330 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0526 Mibi-ChrMibi05 5066155 5068196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0526 242 333 B3 DNA Binding Superfamily AT1G19220 31.522 1.55e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi05g0526 AUX_IAA 8.8e-87 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0526 05 5066155 5068196 Mibi05g0526 05 5066155 5068196 ECH