Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0524 ATGGAACTCTGTGAACATGATCATTTTTTGGAAGAATTACTGGCTGTGAGAAGGGAAGTATGGGATACCATCCCATCAGATTCAAACCAACTCTTCTCTGATGGCTGGGGTTTTGATTGTTATGATCAAAACTCGCTTGCTTTTCATCCAAACTCTTCAACCTGTCAAGAAATTCCTCAGAGTTACCTCACCAGCAACAACAATTATGCCTTCAACGAAATCTACAGTTCATTACTTGATGAATTCTCTGTTCCCCAGAATGTTGATTCATCTTCTTCATCCTATAATGTTCTTGATACACCAGTTCTGGGTCAAGAAGATTACCCATTGTCCATGATGGAAGATTTTGAGGATCCGGGTTTGCTAGGGGATGAACTTCAGAGTTTGGACCTGCAAGCCCCATGCAAGATAGAGCCAAGTCAATCCCCAGAAATGCCAATTTTCAACATGGGTGATGCTTCTTTGGAGAGAAAAAATCGAGCAAAGAAGCTTCAGGGCCAACCCTCCAAGAATTTAATGGCTGAGAGGAGAAGAAGAAAGAGGTTAAATGATCGCCTCTCAATGCTGAGATCAATTGTCCCCAAGATAAGTAAGATGGACAGAACATCTATCCTTGGAGACACTATAGATTACATGAAAGAACTCCTGGAGAAGATTAACAAATTGCAACAAGAATTAGAGGTGGATTCAAACATGGAAGGCATTTTCAAGGATGCAAAGCAAAATGAGCTCTTGGTGATGAGAAATACACCCAAGTTTGAAGTTAAGAGGAAGAATGAGGATACACAGATTGAAATTTGCTGTGCAGGAAAGCCAGGATTGCTGCAATCTACAATAAACACTTTGGAAGCATTGGGTCTTGAGATTGAACAATGTGTCATAAGTTGTTTCAATGATTTCACTGTGCAGGCTTCTTGCTCAGAGGAAATGGGGCAGAGGACAATGCTGAGTTGTGAAGATATAAAACAAGCGTTGTTTAGAAGTGCAGGGTATGGAGGAAGATGTTTGTAG 1011 0.4085 MELCEHDHFLEELLAVRREVWDTIPSDSNQLFSDGWGFDCYDQNSLAFHPNSSTCQEIPQSYLTSNNNYAFNEIYSSLLDEFSVPQNVDSSSSSYNVLDTPVLGQEDYPLSMMEDFEDPGLLGDELQSLDLQAPCKIEPSQSPEMPIFNMGDASLERKNRAKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLEKINKLQQELEVDSNMEGIFKDAKQNELLVMRNTPKFEVKRKNEDTQIEICCAGKPGLLQSTINTLEALGLEIEQCVISCFNDFTVQASCSEEMGQRTMLSCEDIKQALFRSAGYGGRCL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0524 336 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 73 331 - -
Mibi05g0524 336 SMART finulus 172 221 IPR011598 GO:0046983
Mibi05g0524 336 Gene3D - 155 230 IPR036638 GO:0046983
Mibi05g0524 336 CDD ACT_UUR-ACR-like 262 325 - -
Mibi05g0524 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 170 228 IPR036638 GO:0046983
Mibi05g0524 336 Coils Coil 205 232 - -
Mibi05g0524 336 Pfam Helix-loop-helix DNA-binding domain 172 215 IPR011598 GO:0046983
Mibi05g0524 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 166 215 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0524 Mibi-ChrMibi05 5046333 5047672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0524 147 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 64.249 2.76e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi05g0524 HLH 7.1e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0524 05 5046333 5047672 Mibi05g0524 05 5046333 5047672 ECH