Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0514 ATGGTGCTAACAGGAGTGCAACTGCTTATTGAAGATGATCATGTGGTGATTGACAATGGCATACTAAAGGTCACCTTGTCAAATCCTGGGGGATTAGTCACAGGAATAGAATACAATGGCATCGACAACTTGCTTGAATATCAAAACGACGAATCTAATAGAGGCTACTGGGATCTTGTGTGGAGTTCACCGACTAGTACGGGAACCAGTGGAATATTTGATGTGATAAAGGGAACCAACTTGCAAGTGATAGTGGAAAATGAGCAACAAGTTGAGTTATCATTCACAAGAACGTGGGATGCTTCACTTGAAGGCAAGCTGGTTCCCTTAAACATCGATAAAAGGTCATTAACCTCATAA 360 0.4139 MVLTGVQLLIEDDHVVIDNGILKVTLSNPGGLVTGIEYNGIDNLLEYQNDESNRGYWDLVWSSPTSTGTSGIFDVIKGTNLQVIVENEQQVELSFTRTWDASLEGKLVPLNIDKRSLTS 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0514 119 Pfam Rhamnogalacturonate lyase family 10 116 IPR010325 -
Mibi05g0514 119 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 13 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0514 Mibi-ChrMibi05 4906784 4907546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0514 5 115 Polysaccharide Lyase AT1G09910 67.568 6.26e-49 162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0514 05 4906784 4907546 Mibi05g0514 05 4906784 4907546 ECH