Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0512 ATGGCTTTATCCTATCTAGAAGCCACCCTCCAAATGGGAAACTCAAGTCAAATAAAATGTTATTCGGTCTACCTTCCACCTAAATCTCCTGCTCCCAATGGAGATTTTCAATTGCAAGACATCCTCGTCAAGTCTGCTAATAAAAGAAGACGATCGATGATGACGATGATCCTCACCAACCGTTTCCTGTTCTTCATGCTGCTCCTGGTTTTGGTTCAGGGCTACGTTCCTTATCCAGGAGTGCGATTGGAAATTCAAGATAAGCATATTGTGATGGATAATGGCATAGTCCAAGTCACCTTATCAAATCCTGAAGGATCAGTCACCGGAATCCAATACAATGGAATTGACAATTTGCTTGAAGTTGAAAACAAGAAATTTGATAGAGGTTACTGGGATGTTGTATGGGGAAAGGCTGGTAAAAATGGAACAAAGGGTATACTGGATAGGTTGGAAGCCACAAATTTTACAGTAATTGTAGAAAATGAAGAACAGTTAGAATTGTCATTCACCAGAACATGGCTACCTTCACTTGAGGGAAAGATTCCTCCCCTCAGTATCGATAAAAGATTCATAATGCTTCGTGGCTCATCGGGTTTCTACACCTATGCCATATACGAGCGTTTGAAGGGATGGCCTGGCTTCAATCTTGACAATACTCGGATTGCATTTAAGCTTCGGAAAGACAAGTTCCATTACATGGTTGTAGCAGACAATAGGCAAAGATTCATGCCTCTGCCTGATGATCGGTTGGAAGGAAGAGGGCAAGTTCTAGCATACCCTGAGGCTGTCCTCCTTGTCAATCCTGTTGAGCCTGAATTCAAAGGGGAGGTGGATGACAAGTATCAGTACTCGTGCGAGAGTCGTAACAACAAGGTTCATGGTTGGATGTGCTTGGATCAATCTGTTGGGTTCTGGCTAATTACCCCTAGCTATGAGTTCCGATCTGCTGGGCCCCTCAAACAATATATCACTTCTCATGTGGGCCCCACCACACTCTCTGTATTTCATAGCACGCATTATTCAGGAGCAGATCTAGTAATGAAATTTGGGCCAGAAGAAGATTGGAAGAAAGTGTATGGGCCCATTTTCATATACCTTAATTCTTTATCTAACGGAGAAAGCCCAATCATGCTATGGGAAGACGCCAAACAGCAGACTGTCAACGAAATTGAAAGCTGGCCCTATGCATTTCCAGCCTCACAAGATTTTCCCTCATCTTACCAACGAGGTAAGGTTAAAGGAAGATTACTGGTACAAGACAGGTTTATTACGGATGGGTGCGTCCCAGCGAGTGGTGCTTATGTGGGATTGGCTGCGATTGGTGAAGCAGGATCTTGGCAGAGAGAATACAAGGGTTATCAATTTTGGACCATCACTGATGATAAAGGCTACTTCACAATCACTAATATACGGGCTGGGCAGTATAATCTTTACTCCTGGGTCACTGGATTTATCGGGGATTATCGATATGACAATGTCATTAACATAACTTCAGGTTGTGAACATGATGTGGGAGAACTTGTTTATGAGCCTCCAAGATATGGCCCTACATTGTGGGAAATAGGCATTCCTGATCGCTCTGCAGCTGAATTCTATATCCCAGATCCAAATCCCATGTACATTAACAGACTTTATGTCAATCATTCAGATAGGTATAGGCAATATGGATTGTGGGCGAGGTATGCAGAATTGTATCCAGATGAAGACTTGGTCTACACCATAGGAACTAGTGAGTACAAAAAAGATTGGTTTTTTGCTCAAGTTAATAGGAAGATAGATAACAAGACATACCAAGAAACCACGTGGCGAATTAATTTCAAACTTGATAATGTAAATACGAATGGAACCTACAAATTGCGATTGGCTTTGGCATCTGTGCACGCTGCTGAGCTGCAAGTTCTGGTAAATAACTCAGAAGCAAACCCACCTTTGTTTTCAAGTGGAGTGATTGGAAAGGAAAACACAATAGCCAGACATGGAATTCATGGGCTATATTGGCTGTTCAACGTTGATGTGCAAGGCACTCTACTTGTGCAGGGGAATAATACTTTTTTTCTAAAGCAAACTAGAAACACCAGTCCTTTTATAGGGATTTTGTATGATTATATTCGCTTAGAAGGGCCCTCTTCTGTAACTAGTAATGAACGTAATATATGA 2160 0.4199 MALSYLEATLQMGNSSQIKCYSVYLPPKSPAPNGDFQLQDILVKSANKRRRSMMTMILTNRFLFFMLLLVLVQGYVPYPGVRLEIQDKHIVMDNGIVQVTLSNPEGSVTGIQYNGIDNLLEVENKKFDRGYWDVVWGKAGKNGTKGILDRLEATNFTVIVENEEQLELSFTRTWLPSLEGKIPPLSIDKRFIMLRGSSGFYTYAIYERLKGWPGFNLDNTRIAFKLRKDKFHYMVVADNRQRFMPLPDDRLEGRGQVLAYPEAVLLVNPVEPEFKGEVDDKYQYSCESRNNKVHGWMCLDQSVGFWLITPSYEFRSAGPLKQYITSHVGPTTLSVFHSTHYSGADLVMKFGPEEDWKKVYGPIFIYLNSLSNGESPIMLWEDAKQQTVNEIESWPYAFPASQDFPSSYQRGKVKGRLLVQDRFITDGCVPASGAYVGLAAIGEAGSWQREYKGYQFWTITDDKGYFTITNIRAGQYNLYSWVTGFIGDYRYDNVINITSGCEHDVGELVYEPPRYGPTLWEIGIPDRSAAEFYIPDPNPMYINRLYVNHSDRYRQYGLWARYAELYPDEDLVYTIGTSEYKKDWFFAQVNRKIDNKTYQETTWRINFKLDNVNTNGTYKLRLALASVHAAELQVLVNNSEANPPLFSSGVIGKENTIARHGIHGLYWLFNVDVQGTLLVQGNNTFFLKQTRNTSPFIGILYDYIRLEGPSSVTSNERNI 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0512 719 SUPERFAMILY Galactose mutarotase-like 87 369 IPR011013 GO:0003824|GO:0005975|GO:0030246
Mibi05g0512 719 FunFam Rhamnogalacturonate lyase B 406 505 - -
Mibi05g0512 719 CDD RGL4_C 520 707 - -
Mibi05g0512 719 CDD RGL4_N 81 369 - -
Mibi05g0512 719 Pfam Polysaccharide lyase family 4, domain III 518 706 IPR029411 -
Mibi05g0512 719 Gene3D - 516 707 - -
Mibi05g0512 719 Pfam Rhamnogalacturonate lyase family 85 278 IPR010325 -
Mibi05g0512 719 Pfam Polysaccharide lyase family 4, domain II 432 503 IPR029413 -
Mibi05g0512 719 Gene3D - 82 346 IPR014718 GO:0030246
Mibi05g0512 719 SUPERFAMILY Galactose-binding domain-like 516 707 IPR008979 -
Mibi05g0512 719 Gene3D - 406 504 - -
Mibi05g0512 719 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 86 710 - -
Mibi05g0512 719 SUPERFAMILY Starch-binding domain-like 408 501 IPR013784 GO:0030246
Mibi05g0512 719 CDD RGL4_M 409 508 IPR029413 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0512 Mibi-ChrMibi05 4895856 4900970 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0512 81 710 Polysaccharide Lyase AT1G09890 65.931 0.0 871