Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0500 ATGCCTCACAGAGCGACTTACATTTTTCCGAGGCAATTTCCGGAACGGAGGTCGGATGATGAATCATCCCAACAGCTAATAGATCACGAGAAGAAGAGGATCTTCGAATCAATCAAATCGGGAAAGTTTAGAGCTGAATGTGACGATAAAAAGAAGCCGTCACTATCAACCACCACTCCCATAAAAAACGATGATGACATTTACTCGCCAAGTAAACACTCAGCTGTATCTGATCTTTTCACGGGTGGTGGCGGCAAGCCTCGGACTAAACACAAGCAAATTATTGCTGATATCTGCAATTGGTCCACCGAGAAAAAGGGGGGGAAATCAAATCACGTGAAAGCGTACTCTCACAGTCACAGGTTTTCAACCGAGGAAGAACGCGAGCTTCTTCTTCGGCCGCCGGCGACGGAGGCGGTGAAGAATTCGGCCATTGACCAGAGCTTTGATCGGCAGGTGTCGTTACCGAGGTTGTCGAGTAATGGGAGTAGCTATGCTGGGAGCTTGTTCTCAGGGACAACGTTGGATGGGAATTTTTCAAGTGACATTAAGGAGGAGACGACGGCGTCGTCGATTTTTGTATCGTCGAGGAAGCAAAAGGAAGATGAAAAAGAGAGTAAAGAAAAGATGGTTCAGAAATCCATAGAGAGCTACCACCTGCAACTCACGTTGGCTAAGAGGCTCACTGGTCTAGCAAGTATTGCTTCTGAGCCTGCGCTTTCTCTGGGAACTGAAATCGAAACTTGGGATGCTGAATCCGTTTCTTATCGCTTATGGGTGAGCGGCTGTTTATCATACTCTGACAAGATAACGGATGGTTTCTATAACATTCTGGGGATAAATCCGTATTTGTGGGTAATGTGCAATGATGAAGAGGAGGGAAGGCGGCTGCCAACTCTCTTGTCGCTTAGAGCAGTTGAACCTAGCGAGACATCTATGGAGGTGATTCTTGTTGATATCCATGAGGATTTCAGACTAAAGCAACTTCAAGAGAAAGCACAAGAATTATCTTGTGCTTCAGAGAACACCTTGGTTTTGGTGGAAAGGCTAGGAAAACTTGTTGCCATATATATGGGGGGTACTTTTCCGGCAGAGCAAGGTGATCTCCTCGGGCACTGGAAGTTGGTTAGTAAGCGATTGAGGAATTTTCACAACTGTGTTGTGCTTCCTATCGGCAGCATATCTTCAGGACTTTGTAGGCATCGAGCAATTCTTTTCAAGAGGTTGGCAGATTACATAGGTTTGCCATGCCGTATTGCTCGGGGTTGCAAGTATTGTGCTGCTGACTATCGATCCTCCTGCCTTGTCAAGATTAAAGATGACAAGCAGTTCTCTAGGGAATATGTAGTTGATCTAGTTGGGGAGCCAGGAAATATCCATGGACCAGATTCCTCCATCAATGGAGCATATGTCTCCTCTATGCCTTCCCCGTTTCAGATTTCTCATTTAAAGGAATCCCAATCACCCTGCCTGGACGTTGCAGCATATTCTGAATCCATAAGTCCCAATCATGGTGTTGTTGTTACGGACAGTCATTTATATTCAGGCTGTGCACAGAACGATCGGAAAGCTAGTGAAATTGATTTGCTAATAAACCCGACGGGCCCCATTTACTCACCCGTTGATCAAACTTCGGAAGGAACAGAACCTTCACTAGTTCCTTTTGGTTTAAAAAGGAATGATGAAGAATGTGCAGTTCTAGGTTCAATTTTGCCTTCAATCTGGGAAGGTGAATCTGAATCCCTTCATACACCAGTCGAGGCATCATTACATGAATATCCCAGGCTTGGTGAAGATCCAGTTGCAGTACAAGAAACTTCCAACCATGAGAAGAGTTCTCTGAAAAAATCTATCTCGAGCTCTTCAAACCAGTCAGAAACAGAGAAGGTAGACAATGGACTTGAAAACCCCGGTTGCTTTCCTGCTACAGATATTCCAAGATACTTGAATCTTGAACCATCACTTGCAATGGACTGGCTGGAGATATCATGGGATGATTTACGGATCAAAGAGCGTGTTGGTGCCGCTGATTCTGTTGTCTCTATTTTATCCTTTGCAGGTTCATTTGGGACAGTGCATCGTGGGGAATGGCACGGATCAGATGTTGCAGTCAAAGTTCTTTCTATTCAAAATTTCCATGATGATCAATTAAAAGAGTTTCTTAGAGAGGTTGCAATAATGAAGCGCGTACGCCATCCAAATGTGGTGCTCTTCATGGGTGCAGTTACAAAACGCCCTCATCTGTCCATAGTGACAGAATATTTGCCTAGGGGTAGTTTATACCGCCTGATTCATAGACCCACAACTGGCGAAAATCTGGATCAAAGGAGAAAACTGCGGATGGCTTTAGATGTGGCTAAAGGGATCAACTACCTCCACTGCCTTAACCCTCCGGTTTTGCACTGGGATCTCAAATCTCCGAACTTGTTAGTGGACAAAAATTGGACCGTAAAGGTGTGCGACTTTGGATTGTCAAGATTCAAGGCCAACACTTTCATATCATCAAAATCCGTTGCTGGGACACCCGAATGGATGGCTCCTGAATTCCTTCGTGGAGAACCTTCAAATGAAAAGTCTGATGTTTACAGTTTTGGAGTCATCTTGTGGGAACTTGTGACCATGCAACAGCCCTGGAGCGGTCTTGGCCCTGCCCAGGTGGTTGGAGCTGTTGCTTTCCAAAATAGGAGGCTTGCTATCCCTTCAAACATCTCCCCAGCACTTAGCTCCATCATGGAATCTTGTTGGGCTGATGACCCTAACGAACGACCATCTTTCGCTAACATAGTGGACTCGCTGAAGAAGTTGCTGAAATCTCCAGCTGAGGTTATAAAAATGGGTGGGACATGA 2847 0.4528 MPHRATYIFPRQFPERRSDDESSQQLIDHEKKRIFESIKSGKFRAECDDKKKPSLSTTTPIKNDDDIYSPSKHSAVSDLFTGGGGKPRTKHKQIIADICNWSTEKKGGKSNHVKAYSHSHRFSTEEERELLLRPPATEAVKNSAIDQSFDRQVSLPRLSSNGSSYAGSLFSGTTLDGNFSSDIKEETTASSIFVSSRKQKEDEKESKEKMVQKSIESYHLQLTLAKRLTGLASIASEPALSLGTEIETWDAESVSYRLWVSGCLSYSDKITDGFYNILGINPYLWVMCNDEEEGRRLPTLLSLRAVEPSETSMEVILVDIHEDFRLKQLQEKAQELSCASENTLVLVERLGKLVAIYMGGTFPAEQGDLLGHWKLVSKRLRNFHNCVVLPIGSISSGLCRHRAILFKRLADYIGLPCRIARGCKYCAADYRSSCLVKIKDDKQFSREYVVDLVGEPGNIHGPDSSINGAYVSSMPSPFQISHLKESQSPCLDVAAYSESISPNHGVVVTDSHLYSGCAQNDRKASEIDLLINPTGPIYSPVDQTSEGTEPSLVPFGLKRNDEECAVLGSILPSIWEGESESLHTPVEASLHEYPRLGEDPVAVQETSNHEKSSLKKSISSSSNQSETEKVDNGLENPGCFPATDIPRYLNLEPSLAMDWLEISWDDLRIKERVGAADSVVSILSFAGSFGTVHRGEWHGSDVAVKVLSIQNFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPTTGENLDQRRKLRMALDVAKGINYLHCLNPPVLHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRRLAIPSNISPALSSIMESCWADDPNERPSFANIVDSLKKLLKSPAEVIKMGGT 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0500 948 Gene3D Transferase(Phosphotransferase) domain 1 757 944 - -
Mibi05g0500 948 FunFam Serine/threonine-protein kinase isoform 1 657 756 - -
Mibi05g0500 948 Gene3D Phosphorylase Kinase; domain 1 660 755 - -
Mibi05g0500 948 FunFam Serine/threonine-protein kinase CTR1 757 942 - -
Mibi05g0500 948 MobiDBLite consensus disorder prediction 46 68 - -
Mibi05g0500 948 Pfam Protein tyrosine and serine/threonine kinase 686 932 IPR001245 GO:0004672|GO:0006468
Mibi05g0500 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Mibi05g0500 948 MobiDBLite consensus disorder prediction 13 31 - -
Mibi05g0500 948 SMART serkin_6 680 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0500 948 MobiDBLite consensus disorder prediction 1 31 - -
Mibi05g0500 948 MobiDBLite consensus disorder prediction 602 637 - -
Mibi05g0500 948 Pfam Ethylene-responsive protein kinase Le-CTR1 251 459 - -
Mibi05g0500 948 PRINTS Tyrosine kinase catalytic domain signature 752 765 IPR001245 GO:0004672|GO:0006468
Mibi05g0500 948 PRINTS Tyrosine kinase catalytic domain signature 793 811 IPR001245 GO:0004672|GO:0006468
Mibi05g0500 948 PRINTS Tyrosine kinase catalytic domain signature 859 881 IPR001245 GO:0004672|GO:0006468
Mibi05g0500 948 PRINTS Tyrosine kinase catalytic domain signature 903 925 IPR001245 GO:0004672|GO:0006468
Mibi05g0500 948 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 223 937 - -
Mibi05g0500 948 CDD STKc_MAP3K-like 687 932 - -
Mibi05g0500 948 SUPERFAMILY Protein kinase-like (PK-like) 686 931 IPR011009 -
Mibi05g0500 948 MobiDBLite consensus disorder prediction 613 631 - -
Mibi05g0500 948 ProSiteProfiles Protein kinase domain profile. 678 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0500 Mibi-ChrMibi05 4768309 4774750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0500 1 947 MAP Kinase Kinase Kinase AT4G24480 54.188 0.0 1016
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mibi05g0500 PK_Tyr_Ser-Thr 6.4e-64 CL0016