Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0490 ATGGAAGCGGAACGCCTTCTTGGGGTAGCCGAGAAGCTCCTACAGAATCGCGACCTCAACGGCTCGAGGGACTTCGCCATTTTGGCTCAGGAAGCCGAACCCCTTCTAGAAGGTTCCGATCAGATCCTAGCCGTCATCGATGTGCTTCTCGCCGCCGATAAACGCGTCAACAACCACCACGACTGGTACGCCATTCTCCAGGTAGATCGTCGATCCAACGATTTCGATCTCATCAAGAAACAGTACCGTCGTCTCGCTCTCCTCCTTCACCCTGACAAGAACAGATTCTCCCTCGCCGATCACGCCTTCCGCCTCGTCGCCGAGGCCTGGGCCGTACTATCCGACCAGCCTAAGAAGGCGAACTTCGACAAGGAGCTCGGTTATTTCTCTAGGGTTGATTTGAGTATGCCTAGCTGGGTTCAACAGGACAAATTGCAGGTGCGTAGGGGTGGGCCCGAGCCCGTTGAGCGGAATCAGGGCCCGGATCCGAGAAATGGTGCCGTGAGGGAGGAGGAAGCCGATGAGAATCCACGGCGGAGGCCGACGTTCTGGACTACATGTCCGTACTGTTATTATCTATATGAATACCCTAAGATTTATGAGAATTGTTGTCTGAGATGCCAGAATTGCGAGAAGTCCTTCCATGGCGCTTCGATTCCTTCTTTGCCGCCTCTTGTGCCTGGACAAGAGGCTTATCATTGTTGTTGGGGTTTCTTTCCGATGGGATTTTATGTCGGAAATACTGCTGGTGGGAAGTCGTCGGCTGTGCCTTCCAGTTTCAATTCGCCGCCGCCGGTGTCAACTGCGCCGCCACAGGCAGTGAATGGCATGCATAATGGCCCGCCGGCGGTGGCGGCGGTTCCGATCTCTTCGGGTTCGAGGGGGAGGGGGGTGACGCAGAATGGGAGTGCTTCAGAGGTCGGTAGTGTTAAGAGGAAGCGAGGAAGGCCTCGGAAAAATCCATTGCCTGCTTTCCTAGCTCCCCGATTGTATCTAAAATGTCCAGTGCCTGGCATCTTCAATTGGCACAGGGCGCGAGGTTGTCTGACCTCTTCCCTCTCTTTCTCCGGCACATCGCTCTGCTTCTTCTTCTCTTTCGGCCCGGCGGCTTCTCTTCTGTCCACTGTTCTCTCCTCTTCTTTATTCCGGTATGCACTGTTTGATGCTTCACGATTGAAGTGGGTAATTAATATCACTTAA 1200 0.5408 MEAERLLGVAEKLLQNRDLNGSRDFAILAQEAEPLLEGSDQILAVIDVLLAADKRVNNHHDWYAILQVDRRSNDFDLIKKQYRRLALLLHPDKNRFSLADHAFRLVAEAWAVLSDQPKKANFDKELGYFSRVDLSMPSWVQQDKLQVRRGGPEPVERNQGPDPRNGAVREEEADENPRRRPTFWTTCPYCYYLYEYPKIYENCCLRCQNCEKSFHGASIPSLPPLVPGQEAYHCCWGFFPMGFYVGNTAGGKSSAVPSSFNSPPPVSTAPPQAVNGMHNGPPAVAAVPISSGSRGRGVTQNGSASEVGSVKRKRGRPRKNPLPAFLAPRLYLKCPVPGIFNWHRARGCLTSSLSFSGTSLCFFFSFGPAASLLSTVLSSSLFRYALFDASRLKWVINIT 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0490 399 ProSitePatterns Nt-dnaJ domain signature. 103 122 IPR018253 -
Mibi05g0490 399 SUPERFAMILY Chaperone J-domain 54 126 IPR036869 -
Mibi05g0490 399 Gene3D DnaJ domain 48 138 IPR036869 -
Mibi05g0490 399 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 2 314 - -
Mibi05g0490 399 CDD DnaJ 61 115 IPR001623 -
Mibi05g0490 399 ProSiteProfiles dnaJ domain profile. 61 126 IPR001623 -
Mibi05g0490 399 SMART dnaj_3 60 118 IPR001623 -
Mibi05g0490 399 MobiDBLite consensus disorder prediction 163 177 - -
Mibi05g0490 399 PRINTS DnaJ domain signature 63 81 IPR001623 -
Mibi05g0490 399 PRINTS DnaJ domain signature 82 97 IPR001623 -
Mibi05g0490 399 PRINTS DnaJ domain signature 98 118 IPR001623 -
Mibi05g0490 399 MobiDBLite consensus disorder prediction 292 318 - -
Mibi05g0490 399 MobiDBLite consensus disorder prediction 293 307 - -
Mibi05g0490 399 MobiDBLite consensus disorder prediction 146 177 - -
Mibi05g0490 399 Pfam DnaJ domain 61 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0490 Mibi-ChrMibi05 4683604 4686903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0490 2 322 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 47.321 2.77e-96 290