Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0475 ATGGGAGAAGATTGTGGAACCTGGGAGCCACAGCGGCATTTGGATTGGCAATCACCCACCTTAAGCTCTTTTAGGGCTCCATGTGAGGGAAAGCAGAGCGGTGTTTCTGCATATATGAACCCTGGCATTGATAATATGGTCATGTCTAATAAGGCAATGCCAGCTTATGCATCCTCTGTGTTGCCTCATTTGCAATTAGGATATTCTAATGAAACACCTCATGGTTGGTTTTACTGTTTACCTCGGTTTCGTCAGGCCTTCATGCCTGCTCCCAACTTCTATGTTAAGGGAAATCTCCCCGCTGAACAAGCCGAAGGGTTGGGAGAGGAAACTGCTCCCAATCGGGAAACACAAAAACAGTTCCTTGTTATTGATCAGACTGCTGATCAGACCACTTTCATTTATAGTCCTCGCCTGGACCCTTGGCATTCCAATTCCAAACACTATGGTCCTGACAATTCGAATGTCAACAAGCCTCCTTTTAAAAGAGATGTGAATGATCTTATTGGATCAAGTTTTCCGGCCAAAGTTGATGAAAACCAGGAAAAGGACGTGGAAAGTGAGATGCATGAAGATACGGAAGAAATTAATGCATTGCTTTACTCGGACAGTGATGACTACTCTGCTGAGGATGAGGATGAAGTTACGAGCACAGGGCATTCTCCAAGCACGATGACCACTCATCATGATAGCCGAGAAATGTTTAGAGCAGCCACTGAAGAAGTCGAGACGTCCACTGGAAAATCAAAGAAGAGGAAGCTGTCAGACTGTGCTTATGATGACACAGCCACCTCTCTGAATCTGAAGAGAGCCAATGAGTATGTGGGTGGAGGTGAAGCAGAATCGAGACGCTCTTATGGAAAGAGCCAAGGGTCTGGTGAAATGGGTTCCTTGTCAGGCAACAAGAAGATGAGAAAGGAGAAGATCCGAGAAGTTTTGAGCGTTCTGCAGACCATAGTTCCTGGTGGAAAGGACAAGGACCCACTTGTACTACTCGATGAAGCAATACGTTGGTTAAAGTCCTTGAAACTCGAGGCTAGAGCCCTCGGACTCGATGCATTGTTGAGTTCTTAA 1074 0.4581 MGEDCGTWEPQRHLDWQSPTLSSFRAPCEGKQSGVSAYMNPGIDNMVMSNKAMPAYASSVLPHLQLGYSNETPHGWFYCLPRFRQAFMPAPNFYVKGNLPAEQAEGLGEETAPNRETQKQFLVIDQTADQTTFIYSPRLDPWHSNSKHYGPDNSNVNKPPFKRDVNDLIGSSFPAKVDENQEKDVESEMHEDTEEINALLYSDSDDYSAEDEDEVTSTGHSPSTMTTHHDSREMFRAATEEVETSTGKSKKRKLSDCAYDDTATSLNLKRANEYVGGGEAESRRSYGKSQGSGEMGSLSGNKKMRKEKIREVLSVLQTIVPGGKDKDPLVLLDEAIRWLKSLKLEARALGLDALLSS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0475 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 293 342 IPR011598 GO:0046983
Mibi05g0475 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 303 349 IPR036638 GO:0046983
Mibi05g0475 357 MobiDBLite consensus disorder prediction 226 254 - -
Mibi05g0475 357 PANTHER TRANSCRIPTION FACTOR BHLH145 8 352 IPR037546 -
Mibi05g0475 357 MobiDBLite consensus disorder prediction 203 254 - -
Mibi05g0475 357 CDD bHLH_AtSAC51_like 299 350 - -
Mibi05g0475 357 MobiDBLite consensus disorder prediction 276 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0475 Mibi-ChrMibi05 4528225 4529298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0475 75 347 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 32.852 9.98e-29 111