Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0473 ATGGGTTATTTTTCCTGCAATGCTAACTCTGCAACCACCACCTGCCAATGGGAATGGGATCCTTTCTGCTGGGAAGTAAACACTGACACTGACACTAACACTGCCCCAAAACCAAGAAATTCAAAGCGTAACAAGAAGAAGCTTCCGAATATGAGAAAGTTTGAGTACTCAGACCTGGTGGAAGCAACAAATGGATTCTCAGCAGACAACTTCTTAGGCAAAGGAAGCCATGGCAGCGTCTACAGAGCAACCCTGGACGACGGAAAGCTCATAGCCGCAGTGAAAACATCCAAGTTCAAAAAACCCTCCGCCACAAATCACCGGCCTAATTGTACGAACTGTACCAGCCCTGCAGAGAACGAGATCCACATCCTCTCCAGTATCCCAACCTCTCGCCGCATCGTCAACCTCATCGGCCACTGTACGGACCCCTACCTCAACAAATTGATCGTCGTCGATTTCATGCCCAACGGTTCCCTCCACGATCTCCTCCACTCCATTCCTACTCCCCCCGCCTGGGCCCCACGAATCCGCTTCGCATTGCAGGTAGCAGAGGCGGTTGGGAATCTCCACTGTTCGAAGCCGCCGGTGATTCACCGGGACATCAAATCTTCGAACGTGTTAATCGACGGGGAATGGAACGCGAGAATCGGCGATTTCGGCCTGGCTCTCAGGGGAGAAGAAGCGGAATTTGGCGGGAAGAGTAGTAGGCTGCCGGCGGGGACATTAGGGTATATTGACCCGTGCTATCTTGCGCCGGGGGATCTGAGCGAGAAGAGCGATGTGTTCAGCTTTGGGATACTGTTGCTGGAGATTATAAGCGGTAGGAAGGCAATCGACGTGAAGTACAGTCCTGCGTCCGTGGTTGAGTGGGCCCTGCCGTTAATAAAGCAGGGTGACTTTGACGGAATTCGTGACCGGCGGATAGGGACGCCGTCAGATCCGACGGTGGTAGAGAGGCTGGCGGTGTTGGCGGGGAGGTGTGTGAGGTGGAAGGCGGAGAAGCGGCCGGCGATGGCGGAGGTGGTGGAGTGTTTGAAACAGGTGAGGAAGATGACTCATGGGTGGAGAATGTGGGGGCGCGTGAAGAGGCGCGTGGGGAGGACGGAGAGAGAAGTGTCGGTGAATGGGTTGGTGAAGATGGGAAGCAGAAGAAGAAATGGGAAGGTGTCGAGTGTGTGTGTTGGAGATGATCATGAGAGGAGTGAAGCTGGGAATTATGATCAAGTGGTGGTGAGGTCGAAATCGATTGGTTGTGAAGAAGGTGAGATGAAAATGAAGCGTAATCAAAGTGGGAGTGATCAACCTGGGTTGTTTGTGAGAAGGAAAGAGGAATTGAGGCTCAAAAAGTCGAGGTCTGTCGGAGTTTCGCACAGTCCACGCCTTTTACTTGGACTGGGCAGAGGCAGAGCTTTATAA 1419 0.5292 MGYFSCNANSATTTCQWEWDPFCWEVNTDTDTNTAPKPRNSKRNKKKLPNMRKFEYSDLVEATNGFSADNFLGKGSHGSVYRATLDDGKLIAAVKTSKFKKPSATNHRPNCTNCTSPAENEIHILSSIPTSRRIVNLIGHCTDPYLNKLIVVDFMPNGSLHDLLHSIPTPPAWAPRIRFALQVAEAVGNLHCSKPPVIHRDIKSSNVLIDGEWNARIGDFGLALRGEEAEFGGKSSRLPAGTLGYIDPCYLAPGDLSEKSDVFSFGILLLEIISGRKAIDVKYSPASVVEWALPLIKQGDFDGIRDRRIGTPSDPTVVERLAVLAGRCVRWKAEKRPAMAEVVECLKQVRKMTHGWRMWGRVKRRVGRTEREVSVNGLVKMGSRRRNGKVSSVCVGDDHERSEAGNYDQVVVRSKSIGCEEGEMKMKRNQSGSDQPGLFVRRKEELRLKKSRSVGVSHSPRLLLGLGRGRAL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0473 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Mibi05g0473 472 PANTHER OS01G0253100 PROTEIN 41 353 IPR045271 -
Mibi05g0473 472 Pfam Protein kinase domain 69 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0473 472 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Mibi05g0473 472 SUPERFAMILY Protein kinase-like (PK-like) 49 354 IPR011009 -
Mibi05g0473 472 Gene3D Transferase(Phosphotransferase) domain 1 155 359 - -
Mibi05g0473 472 ProSiteProfiles Protein kinase domain profile. 66 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi05g0473 472 Gene3D Phosphorylase Kinase; domain 1 37 154 - -
Mibi05g0473 472 SMART serkin_6 66 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0473 Mibi-ChrMibi05 4490703 4492210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0473 28 355 Receptor kinase-like Gene Family AT3G59420 38.304 5.95e-65 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mibi05g0473 Pkinase 4.3e-33 CL0016