Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0472 ATGGAATATGTGGAGCAAGATCAGGAGGAGCAGGAAGAAGAGGCAGAGGAAGAAATAGGGATTCCCGTAATTCCCCCAACGAGTTACGACTCAACTCGGCCCAACCCCAACGAAAGGAAACCCGCTCCAACTGCAACCGTCAGATACAGAGAGTGCCAAAAGAATCACGCCGTTAGCATCGGTGGTCACGCCGTTGACGGTTGCGGCGAGTTTCTAGCCGCCGGAGAGGAAGGCACCATCGACGCTCTCAAATGCGCCGCCTGTAACTGCCACCGTAACTTCCACCGGAAGGAGATCGAAGGAGAAACCACCTCCTTCCGCCACCTTCCGCCGCCACACCACCACCAATTCCCCCCTTACTACCGAGGTCCGCCGCCTCCGCCGGGCGGAGGTTACCTCCACCACCACATGGCCAATCCGGCGATGGCTCATCACCGGCCGTTGGCTCTTCCGGCGGCGGCGTCCGGCGGGGGGATGAGTAGGGAGGAGGAGGACATGTCGAATCCGAGCAGTAGCGGAGGAGGAGGAGGAGGGAGCCGGAGCGAAAGGAAGAAACGGTTTAGGACGAAGTTCACGCAGGAGCAGAAGGAGAAGATGCTGGCATTTTCTGAGAAGGTTGGGTGGAGAATTCAGAAGCATGATGAGCCTGCTGTGGAGCAATTCTGTGCGGAGACTGGTGTCAAGAGACAGGTACTCAAGGTTTGGATGCATAATAACAAAAACACTCTCGGTAAGAAACCCTAA 744 0.5685 MEYVEQDQEEQEEEAEEEIGIPVIPPTSYDSTRPNPNERKPAPTATVRYRECQKNHAVSIGGHAVDGCGEFLAAGEEGTIDALKCAACNCHRNFHRKEIEGETTSFRHLPPPHHHQFPPYYRGPPPPPGGGYLHHHMANPAMAHHRPLALPAAASGGGMSREEEDMSNPSSSGGGGGGSRSERKKRFRTKFTQEQKEKMLAFSEKVGWRIQKHDEPAVEQFCAETGVKRQVLKVWMHNNKNTLGKKP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0472 247 MobiDBLite consensus disorder prediction 1 45 - -
Mibi05g0472 247 MobiDBLite consensus disorder prediction 1 19 - -
Mibi05g0472 247 FunFam Zinc-finger homeodomain protein 2 176 245 - -
Mibi05g0472 247 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 20 243 - -
Mibi05g0472 247 Gene3D - 169 244 - -
Mibi05g0472 247 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 48 99 IPR006456 -
Mibi05g0472 247 MobiDBLite consensus disorder prediction 179 194 - -
Mibi05g0472 247 Pfam ZF-HD protein dimerisation region 47 99 IPR006456 -
Mibi05g0472 247 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 184 241 IPR006455 -
Mibi05g0472 247 MobiDBLite consensus disorder prediction 151 194 - -
Mibi05g0472 247 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 49 98 IPR006456 -
Mibi05g0472 247 SUPERFAMILY Homeodomain-like 170 245 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0472 Mibi-ChrMibi05 4479246 4479989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0472 9 243 ZF-HD Transcription Factor Family AT4G24660 54.098 1.54e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mibi05g0472 ZF-HD_dimer 2.9e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2228 08 40052124 40052885 Mibi05g0472 05 4479246 4479989 CCT
Mibi05g0472 05 4479246 4479989 Mibi05g0472 05 4479246 4479989 ECH