Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0461 ATGAAGAGTATCTCAAGACGACTGTTGAGAGTTGAGCATGAACGTATCTGGGAAACCATGGCAGCGCCGCCGCCAAGTCAGCCGATGGAACCACCGATGGTGAGCTACGACAACAAGGCGATGGCCATAATAATGGGCGTCGTCATCCTAGTATTCTTCGTATCGGGCTTAATTTCCGTGTACAGCCGTCAATGCGGGAACCGACGACTATTCCGAGGTCACATGGATCTCACATTTCCGATGGGCCTGCCTCTATCGGGTTCGCGGGCTCCGGGTCGGGGCGTCGACCCGGAAATAATTAGGAGCTTCCCCACATTCGTGTACTCCACGGTCAAGGGAAGAGGGGCTCTGGCATGCGCTGTGTGCCTGAATGAGTACGAGGACGACGACACTCTGAGGCTGATCCCGAGATGCAGCCACGTGTTCCATCCGGAATGCATCGACGGCTGGCTCAAGTCTCATTACACGTGTCCACTGTGCAGGGCCAACCTGTTGGTTCCAGTGGCAGCACAGGGTGAGGGTGAGGGTGAGGCGACGCCATTGGTAGACGTGGAGATTGCAGATTCAGGAGGAGAGAATGAAAACAGAGGAGGGAATGTAATGAGGAGTAAGACTGTGAGGGAGGGTCAAAGTCGGTCAAGGTCAACGGGATATTTGATGGGGATTCTGTTTGGGAGGTCTCGATCTTTGGGAGATCATAGGAATAACGCTAACTGGGAGAGATATACGCTGAGGTTGGAAGAAGTAAGGACAGGGACGAGGTTGAAACGCACCAGAAGCTGCGTCACTTTTACTAGAATGAGCAGCGGAAAGAGAGGGTATCGTACAAGGAGTGTGGGCAGTAACCATTCACAGTTACGCTTCTCCTACGAACGATTCTTCCCTGCTTCACAATCACATACATTCCCCTTCACGCCCCCAATACAAGACGCTTCTTAG 939 0.5293 MKSISRRLLRVEHERIWETMAAPPPSQPMEPPMVSYDNKAMAIIMGVVILVFFVSGLISVYSRQCGNRRLFRGHMDLTFPMGLPLSGSRAPGRGVDPEIIRSFPTFVYSTVKGRGALACAVCLNEYEDDDTLRLIPRCSHVFHPECIDGWLKSHYTCPLCRANLLVPVAAQGEGEGEATPLVDVEIADSGGENENRGGNVMRSKTVREGQSRSRSTGYLMGILFGRSRSLGDHRNNANWERYTLRLEEVRTGTRLKRTRSCVTFTRMSSGKRGYRTRSVGSNHSQLRFSYERFFPASQSHTFPFTPPIQDAS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0461 312 CDD RING-H2_EL5_like 119 161 - -
Mibi05g0461 312 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Mibi05g0461 312 SMART ring_2 119 160 IPR001841 -
Mibi05g0461 312 MobiDBLite consensus disorder prediction 196 213 - -
Mibi05g0461 312 Pfam Ring finger domain 118 161 IPR001841 -
Mibi05g0461 312 PANTHER RING FINGER DOMAIN-CONTAINING 23 171 - -
Mibi05g0461 312 SUPERFAMILY RING/U-box 99 171 - -
Mibi05g0461 312 FunFam E3 ubiquitin-protein ligase ATL6 86 167 - -
Mibi05g0461 312 MobiDBLite consensus disorder prediction 188 213 - -
Mibi05g0461 312 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 166 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0461 Mibi-ChrMibi05 4398692 4399630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0461 40 273 Rapid Response to Elicitors AT3G05200 38.189 2.24e-40 143