Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0447 ATGGCAGTTGAGCGTCTGATTTTGGATTTGCATTTCTCATTTGCGTTATCATCTCCAAACGACCTTGAGATGGAATCTTCCACAACGCCCCGAGATCGCAGAGCAGACGCTCTTGGAGACCTTCGAGTCCTTCCCGATGAAATCCTCTGCTCAATTTTAGAGGAACTCACTCCTCGAGATGTTGCTCGCCTCTCTTGCGTTAGCAGCGTAATGTACATACTGTGCAATGAAGAACCACTGTGGATGATTTTATGCCTTAAAGGAGCGTCCGGTTTACTTGAGTACAAAGGCTCTTGGAAGAAAACTGCTCTGCATCGTGAGAATTTGCCAGACAAATACATTGATTGCACCAGAGGATTTCTGCATTTTGATGGATTTAATTCGTTACATTTATATAGAAGATTATACAGGTGTCATACCAAGTTGGATGCATTTTATGTGGATAATGGAAATGTGGAAAGAAGAAAAGATGTCTCTCTAGAGGGCTTCCGTGATGAGTATGATGGGAAGAAACCGGTAATGCTTACTGGATTGGCTGATGCGTGGCCTGCAAGGAATAAATGGACTACTGATCAGCTGTTGCTAAACTATGGAGATGTAGCATTTAAGATTTCCCAAAGGAGTTCTCGGAAGATCAAGATGAAGTTTAAGGATTATGTTTCATACATGAAGCTTCAGCGGGATGAAGATCCATTGTACATTTTTGATGAAAAGATTGGTGAAGTTGCACCCAACTTGCTGAAGGATTACCGTGTGCCTCATTTGTTTCAAGAAGACTACTTTGATTTTTTAAATGATGATAAACGACCACCCTACAGGTGGCTCATTATCGGGCCAGAGAGATCTGGTGCCTCTTGGCATGTTGATCCTGCCCTTACTAGTGCATGGAATACTCTTCTTTCTGGTCGGAAAAGGTGGGCATTGTATCCTCCAGGAAAGGTGCCTTTGGGAGTCACAGTGCATGTCAATGAAGATGATGGTGATGTTAACATTGAGACACCATCATCACTGCAGTGGTGGCTGGACTTTTATCCACTTCTTGCTGATGAAGACAAGCCAATTGAGTGTACACAACTACCTGGAGAGACAATTTATGTTCCAAGTGGATGGTGGCACTGTGTTCTAAACTTGGAAACTACTATCGCTGTCACACAGAATTTCGTGAATTCCAGTAACTTTGAATTTGTATGCTTGGACATGGCCCCTGGTTATTGTCATAAAGGAGTTTGCCGTGCTGGATTGCTAGCTCTTGGTGATGATGATTATGAAGATGTCAAAAAGAATATGTTCTGTGATGAACATAATTCAAGTTCTCCCATTCTGTCAAGGAGGGAGAAAAGAGCCAGAAATGATGAAGATGGAGATGATTTGATTTTTGAACGAACAAAAAATGGTGCATCTAGAAGTTATAATGTATGGAAAGATGGATTTTCTTATGATATAAATTTCCTATCCATGTTTTTGGATAAGGATAGAGACCACTACAGGTCCCCTTGGAGCTCAGGCAACAGCATTGGCCAGCGAGAACTAAGAGAATGGCTATCCAAACTTTGGGTTGGAAAACCTGAAATGAGAGAGCTAATATGGAAGGGGGCGTGTATTGCACTAAATGCTGACAAGTGGTCAGAATGCCTGTATGAAATTTGTTCCTTGCACGATATGCCCTCTCCCCTTGATGATGAAAGGCTTCCTGTTGGTACGGGTAGCAATCCTGTTTTTCTTGTGGGAAACTCTGTTGTCAAAATTTTTGTTGAAGGAGGGCCAGAAGCTGCACTTTATGGTTTAGGCACAGAGCTCGAGTTTTACAATATATTGCAAGAAGTCAACTCCCCTCTCAGGAATTATATTCCTGAGGTTTTGGGCAGCGGGATTCTTTATCTTGACAACAGAACTTATACCAACCTGCCTTGGAATGGAAAGGGAGTTCCTGATATTGTTATCAAAAATAACTTAACCAGGCAAAAATGTGGAGTTGATGATTTCTCATTCGGGGTATGGGGAAAGAAACTGTTTGAATATAGGACTGCTGAAATGCCGGAACACGAATCAGTTAGTTCAGCTGGCCACCCAAATATATGGCCTTACATTATAACAAAACGTTGTGAGGGTAAAATATTTGCAGAGTTAAGAGATGTACTATCAAGGGAAGATGCAACAAACTTAGCTTCCTTCCTGGGAGAGCAGTTGCGTCACATGCACCTTTTACCACGTCCACCATTGAATATTTCACCTTTATCTGATATTGAACAGAATTTGGGCTTGCCTCAGATTAATGGTAATGTTTCAAGTTCGAACATGGTAGCAGAGTGGGAAATCTTCATTGAAACTTTAACAAGAAAGAGGAAGGATGTCTTGAGCCGTTTGACCAAGTGGGGAGACCCGATCCCAAGGAAATTGATAGAGAAGGTCGATGAATATATCCCTCATCAATTGGCAAATATGTTGAATATATCTGAGGGCAATGCTTGTAAACCATGCTCCTGGATACACTCTGACATTATGGATGATAACATTTACATGAAACCATCCTGTCTTTCTACCTCAAGTGAAACTTTCGATGATGGAGCGCTGGCAGACAATGGTTTTTTGTGTGATTCCAGGGTGTGTAGAGATGTAAAATCATGGCGCCCTAGTTACATCCTTGATTTCAGCGATCTTTCAATTGGCGATCCTATATTTGATTTGATACCTATTTATTTAGATGTATTTAGAGGTGACTCCTATCTCCTAAAGGTATTTCTAGAAAGCTACAAGCTTCCTTTTGCAATTAATAATTCAAAGAATGATTCGATGGAGAATGATGATAAATTTGGCCGGCTTTCATATCTTGCCATGTGCTACTGTATATTGTATGACGATGATGTCTTGGGAGCTATTTTTAGCATATGGGATGATCTTAGATCAGCAAACTCATGGGAAGAGGTTGAATTGACAGTGTGGGGGGAGCTGAACAATTATAAAGGCTTTCCTTGA 2973 0.412 MAVERLILDLHFSFALSSPNDLEMESSTTPRDRRADALGDLRVLPDEILCSILEELTPRDVARLSCVSSVMYILCNEEPLWMILCLKGASGLLEYKGSWKKTALHRENLPDKYIDCTRGFLHFDGFNSLHLYRRLYRCHTKLDAFYVDNGNVERRKDVSLEGFRDEYDGKKPVMLTGLADAWPARNKWTTDQLLLNYGDVAFKISQRSSRKIKMKFKDYVSYMKLQRDEDPLYIFDEKIGEVAPNLLKDYRVPHLFQEDYFDFLNDDKRPPYRWLIIGPERSGASWHVDPALTSAWNTLLSGRKRWALYPPGKVPLGVTVHVNEDDGDVNIETPSSLQWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCVLNLETTIAVTQNFVNSSNFEFVCLDMAPGYCHKGVCRAGLLALGDDDYEDVKKNMFCDEHNSSSPILSRREKRARNDEDGDDLIFERTKNGASRSYNVWKDGFSYDINFLSMFLDKDRDHYRSPWSSGNSIGQRELREWLSKLWVGKPEMRELIWKGACIALNADKWSECLYEICSLHDMPSPLDDERLPVGTGSNPVFLVGNSVVKIFVEGGPEAALYGLGTELEFYNILQEVNSPLRNYIPEVLGSGILYLDNRTYTNLPWNGKGVPDIVIKNNLTRQKCGVDDFSFGVWGKKLFEYRTAEMPEHESVSSAGHPNIWPYIITKRCEGKIFAELRDVLSREDATNLASFLGEQLRHMHLLPRPPLNISPLSDIEQNLGLPQINGNVSSSNMVAEWEIFIETLTRKRKDVLSRLTKWGDPIPRKLIEKVDEYIPHQLANMLNISEGNACKPCSWIHSDIMDDNIYMKPSCLSTSSETFDDGALADNGFLCDSRVCRDVKSWRPSYILDFSDLSIGDPIFDLIPIYLDVFRGDSYLLKVFLESYKLPFAINNSKNDSMENDDKFGRLSYLAMCYCILYDDDVLGAIFSIWDDLRSANSWEEVELTVWGELNNYKGFP 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0447 990 ProSiteProfiles F-box domain profile. 38 84 IPR001810 GO:0005515
Mibi05g0447 990 SUPERFAMILY Protein kinase-like (PK-like) 563 923 IPR011009 -
Mibi05g0447 990 SMART fbox_2 44 84 IPR001810 GO:0005515
Mibi05g0447 990 Gene3D Cupin 134 389 - -
Mibi05g0447 990 SUPERFAMILY F-box domain 32 92 IPR036047 GO:0005515
Mibi05g0447 990 Gene3D - 28 113 - -
Mibi05g0447 990 FunFam F-box protein At1g78280 132 389 - -
Mibi05g0447 990 SMART cupin_9 232 399 IPR003347 -
Mibi05g0447 990 Pfam Cupin-like domain 168 390 IPR041667 -
Mibi05g0447 990 SUPERFAMILY Clavaminate synthase-like 151 396 - -
Mibi05g0447 990 ProSiteProfiles JmjC domain profile. 241 404 IPR003347 -
Mibi05g0447 990 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 38 608 - -
Mibi05g0447 990 Pfam F-box-like 43 86 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0447 Mibi-ChrMibi05 4293735 4306335 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0447 31 986 Glycosyltransferase AT1G78280 61.260 0.0 1200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mibi05g0447 Cupin_8 8.5e-23 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0447 05 4293735 4306335 Mibi05g0447 05 4293735 4306335 ECH